| Port details on branch 2022Q2 |
- py-pywgsim Modified wgsim genomic data simulator
- 0.5.2 biology
 =0      0.5.2Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2021-09-06 12:57:08
- Last Update: 2023-01-11 15:58:34
- Commit Hash: 77d6847
- Also Listed In: python
- License: MIT
- WWW:
- https://pypi.python.org/pypi/pywgsim
- Description:
- pywgsim is a modified version of the wgsim short read simulator. The
code for wgsim has been modified to allow visualizing the simulated
mutations as a GFF file.
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}pywgsim>0:biology/py-pywgsim@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/biology/py-pywgsim/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/py-pywgsim
- pkg install py39-pywgsim
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-pywgsim listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-pywgsim
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1630888272
SHA256 (pywgsim-0.5.2.tar.gz) = b6726be21629bd1cda12592b536dcd62d250fc4872e47cbcc54066e8a6e8f709
SIZE (pywgsim-0.5.2.tar.gz) = 81724
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Test dependencies:
-
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-plac>=0 : devel/py-plac@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- This port is required by:
- for Run
-
- biology/biostar-tools
Configuration Options:- No options to configure
- Options name:
- biology_py-pywgsim
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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