Port details on branch 2022Q2 |
- ncbi-cxx-toolkit NCBI C++ Toolkit
- 28.0.4 biology =0 28.0.2Version of this port present on the latest quarterly branch.
- Maintainer: yuri@FreeBSD.org
- Port Added: 2018-10-08 07:55:03
- Last Update: 2024-05-07 08:26:36
- Commit Hash: fbadc9b
- Also Listed In: devel science
- License: PD
- WWW:
- https://ncbi.github.io/cxx-toolkit/
- Description:
- NCBI C++ Toolkit provides free, portable, public domain libraries with no
restrictions use. It has been written in the National Center for Biotechnology
Information in Bethesda, MD.
It is vaguely a successor, or a new generation of biology/ncbi-toolkit.
It contains:
* Networking and Interprocess Communication (IPC) library
* MultiThreading Library
* CGI and Fast-CGI Library, HTML Generation Library
* SQL Database Access Library, C++ wrapper library for BerkeleyDB
* C++ IOSTREAM Adaptor/Wrapper Library
* GZIP and BZ2 C++ Wrapper Library with IOSTREAM adaptors
* ASN.1 and XML Serialization Library with C++ Code Generator Tool (datatool)
* Date and Time Library
* File System Function Library
* Command-Line Argument, Configuration and Environment Processing Library
* Sequence Alignment Algorithms Library
* BLAST Engine Library
* Biological Sequences Retrieval and Processing Library
* Portable FLTK and OpenGL based GUI and graphic libraries
* XmlWrapp (XML parsing and handling, XSLT, XPath)
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- ncbi-cxx-toolkit>0:biology/ncbi-cxx-toolkit
- Conflicts:
- CONFLICTS_INSTALL:
- dakota
- libxdiff
- ncbi-blast+
- ncbi-toolkit
- proj
- py*-speedtest-cli
- Conflicts Matches:
-
There are no Conflicts Matches for this port. This is usually an error.
- To install the port:
- cd /usr/ports/biology/ncbi-cxx-toolkit/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/ncbi-cxx-toolkit
- pkg install ncbi-cxx-toolkit
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: ncbi-cxx-toolkit
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1715055866
SHA256 (ncbi-ncbi-cxx-toolkit-public-release-28.0.4_GH0.tar.gz) = 2e4583e7dcb22415633fc5329b0ddca15367d5db79a25d04303e295340441505
SIZE (ncbi-ncbi-cxx-toolkit-public-release-28.0.4_GH0.tar.gz) = 57046657
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake>=4.4.1 : devel/gmake
- python3.9 : lang/python39
- perl5>=5.36<5.37 : lang/perl5.36
- x11.pc : x11/libX11
- xpm.pc : x11/libXpm
- Test dependencies:
-
- python3.9 : lang/python39
- Runtime dependencies:
-
- bash : shells/bash
- python3.9 : lang/python39
- perl5>=5.36<5.37 : lang/perl5.36
- x11.pc : x11/libX11
- xpm.pc : x11/libXpm
- Library dependencies:
-
- libbz2.so : archivers/bzip2
- libcdd.so : math/cddlib
- liblmdb.so : databases/lmdb
- libpcre.so : devel/pcre
- libunwind.so : devel/libunwind
- libzstd.so : archivers/zstd
- libmysqlclient.so.21 : databases/mysql80-client
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- biology_ncbi-cxx-toolkit
- USES:
- compiler:c++17-lang gmake mysql perl5 python shebangfix ssl xorg
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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