| Port details on branch 2022Q2 |
- py-DendroPy Phylogenetic computing library
- 4.6.1 science
 =0      4.6.1Version of this port present on the latest quarterly branch. - Maintainer: wen@FreeBSD.org
- Port Added: 2010-01-09 12:20:30
- Last Update: 2023-06-27 19:34:34
- Commit Hash: 3d9a815
- Also Listed In: python
- License: BSD3CLAUSE
- WWW:
- http://packages.python.org/DendroPy/
- Description:
- py-DendroPy is a python library for phylogenetic scripting,
simulation, data processing and manipulation.
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}DendroPy>0:science/py-DendroPy@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/science/py-DendroPy/ && make install clean
- To add the package, run one of these commands:
- pkg install science/py-DendroPy
- pkg install py39-DendroPy
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-DendroPy listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-DendroPy
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1686639965
SHA256 (DendroPy-4.6.1.tar.gz) = 26fcbe1cb5831301e8f1f2e15a0563620f0b8e29e6d409dd6a2a7c957dd64c16
SIZE (DendroPy-4.6.1.tar.gz) = 15200462
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Test dependencies:
-
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- This port is required by:
- for Run
-
- biology/checkm
Configuration Options:- No options to configure
- Options name:
- science_py-DendroPy
- USES:
- python
- pkg-message:
- For install:
- If you use this library either in whole or in part in your analysis, or
use any code derived from it, please cite it as:
Sukumaran, J. and Mark T. Holder. 2010. DendroPy: A Python library
for phylogenetic computing. Bioinformatics 26: 1569-1571.
- Master Sites:
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