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Port details
p5-Chemistry-Mol Perl toolkit to describe molecules
0.39 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: perl@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2009-05-16 23:29:51
Last Update: 2022-09-07 21:58:51
Commit Hash: fb16dfe
Also Listed In: perl5
License: ART10 GPLv1+
Description:
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb
pkg-plist: as obtained via: make generate-plist
Expand this list (23 items)
Collapse this list.
  1. /usr/local/share/licenses/p5-Chemistry-Mol-0.39/catalog.mk
  2. /usr/local/share/licenses/p5-Chemistry-Mol-0.39/LICENSE
  3. /usr/local/share/licenses/p5-Chemistry-Mol-0.39/ART10
  4. /usr/local/share/licenses/p5-Chemistry-Mol-0.39/GPLv1+
  5. lib/perl5/site_perl/Chemistry/Atom.pm
  6. lib/perl5/site_perl/Chemistry/Bond.pm
  7. lib/perl5/site_perl/Chemistry/File.pm
  8. lib/perl5/site_perl/Chemistry/File/Dumper.pm
  9. lib/perl5/site_perl/Chemistry/File/Formula.pm
  10. lib/perl5/site_perl/Chemistry/Mol.pm
  11. lib/perl5/site_perl/Chemistry/Obj.pm
  12. lib/perl5/site_perl/Chemistry/Tutorial.pod
  13. lib/perl5/site_perl/man/man3/Chemistry::Atom.3.gz
  14. lib/perl5/site_perl/man/man3/Chemistry::Bond.3.gz
  15. lib/perl5/site_perl/man/man3/Chemistry::File.3.gz
  16. lib/perl5/site_perl/man/man3/Chemistry::File::Dumper.3.gz
  17. lib/perl5/site_perl/man/man3/Chemistry::File::Formula.3.gz
  18. lib/perl5/site_perl/man/man3/Chemistry::Mol.3.gz
  19. lib/perl5/site_perl/man/man3/Chemistry::Obj.3.gz
  20. lib/perl5/site_perl/man/man3/Chemistry::Tutorial.3.gz
  21. @owner
  22. @group
  23. @mode
Collapse this list.
Dependency lines:
  • p5-Chemistry-Mol>0:science/p5-Chemistry-Mol
To install the port:
cd /usr/ports/science/p5-Chemistry-Mol/ && make install clean
To add the package, run one of these commands:
  • pkg install science/p5-Chemistry-Mol
  • pkg install p5-Chemistry-Mol
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: p5-Chemistry-Mol
Flavors: there is no flavor information for this port.
distinfo:

Packages (timestamps in pop-ups are UTC):
p5-Chemistry-Mol
ABIlatestquarterly
FreeBSD:11:aarch640.37_10.37_1
FreeBSD:11:amd640.380.38
FreeBSD:11:armv60.37_10.37_1
FreeBSD:11:i3860.380.38
FreeBSD:11:mipspkg-falloutpkg-fallout
FreeBSD:11:mips640.37_10.37_1
FreeBSD:12:aarch640.37_10.39
FreeBSD:12:amd640.390.39
FreeBSD:12:armv60.37_10.37_1
FreeBSD:12:armv70.37_10.37_1
FreeBSD:12:i3860.390.39
FreeBSD:12:mipspkg-falloutpkg-fallout
FreeBSD:12:mips640.37_10.37_1
FreeBSD:12:powerpc64pkg-fallout0.37_1
FreeBSD:13:aarch640.390.39
FreeBSD:13:amd640.390.39
FreeBSD:13:armv60.37_10.38
FreeBSD:13:armv70.390.39
FreeBSD:13:i3860.390.39
FreeBSD:13:mipspkg-falloutpkg-fallout
FreeBSD:13:mips640.37_10.37_1
FreeBSD:13:powerpc640.37_10.38
FreeBSD:13:riscv64pkg-fallout0.38
FreeBSD:14:aarch640.39pkg-fallout
FreeBSD:14:amd640.39pkg-fallout
FreeBSD:14:armv60.39pkg-fallout
FreeBSD:14:armv70.39pkg-fallout
FreeBSD:14:i3860.39pkg-fallout
FreeBSD:14:mipspkg-falloutpkg-fallout
FreeBSD:14:mips640.38pkg-fallout
FreeBSD:14:powerpc640.37_1pkg-fallout
FreeBSD:14:riscv640.38pkg-fallout
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. p5-IO-String>=0 : devel/p5-IO-String
  2. p5-Math-VectorReal>=1.0 : math/p5-Math-VectorReal
  3. perl5>=5.32.r0<5.33 : lang/perl5.32
  4. perl5>=5.32.r0<5.33 : lang/perl5.32
Runtime dependencies:
  1. p5-IO-String>=0 : devel/p5-IO-String
  2. p5-Math-VectorReal>=1.0 : math/p5-Math-VectorReal
  3. perl5>=5.32.r0<5.33 : lang/perl5.32
This port is required by:
for Build
  1. science/p5-Chemistry-3DBuilder
  2. science/p5-Chemistry-Bond-Find
  3. science/p5-Chemistry-Canonicalize
  4. science/p5-Chemistry-File-MDLMol
  5. science/p5-Chemistry-File-Mopac
  6. science/p5-Chemistry-File-PDB
  7. science/p5-Chemistry-File-SLN
Expand this list (20 items / 13 hidden - sorry, this count includes any deleted ports)
  1. Collapse this list).
  2. science/p5-Chemistry-File-SMARTS
  3. science/p5-Chemistry-File-SMILES
  4. science/p5-Chemistry-File-VRML
  5. science/p5-Chemistry-File-XYZ
  6. science/p5-Chemistry-FormulaPattern
  7. science/p5-Chemistry-InternalCoords
  8. science/p5-Chemistry-MacroMol
  9. science/p5-Chemistry-MidasPattern
  10. science/p5-Chemistry-Mok
  11. science/p5-Chemistry-Pattern
  12. science/p5-Chemistry-Reaction
  13. science/p5-Chemistry-Ring
  14. science/p5-PerlMol
  15. Collapse this list.
for Run
  1. science/p5-Chemistry-3DBuilder
  2. science/p5-Chemistry-Bond-Find
  3. science/p5-Chemistry-Canonicalize
  4. science/p5-Chemistry-File-MDLMol
  5. science/p5-Chemistry-File-Mopac
  6. science/p5-Chemistry-File-PDB
  7. science/p5-Chemistry-File-SLN
Expand this list (20 items / 13 hidden - sorry, this count includes any deleted ports)
  1. Collapse this list).
  2. science/p5-Chemistry-File-SMARTS
  3. science/p5-Chemistry-File-SMILES
  4. science/p5-Chemistry-File-VRML
  5. science/p5-Chemistry-File-XYZ
  6. science/p5-Chemistry-FormulaPattern
  7. science/p5-Chemistry-InternalCoords
  8. science/p5-Chemistry-MacroMol
  9. science/p5-Chemistry-MidasPattern
  10. science/p5-Chemistry-Mok
  11. science/p5-Chemistry-Pattern
  12. science/p5-Chemistry-Reaction
  13. science/p5-Chemistry-Ring
  14. science/p5-PerlMol
  15. Collapse this list.

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message

Master Sites:
Expand this list (12 items)
Collapse this list.
  1. ftp://ftp.auckland.ac.nz/pub/perl/CPAN/modules/by-module/Chemistry/
  2. ftp://ftp.cpan.org/pub/CPAN/modules/by-module/
  3. ftp://ftp.cpan.org/pub/CPAN/modules/by-module/Chemistry/
  4. ftp://ftp.funet.fi/pub/languages/perl/CPAN/modules/by-module/Chemistry/
  5. ftp://ftp.kddlabs.co.jp/lang/perl/CPAN/modules/by-module/Chemistry/
  6. ftp://ftp.mirrorservice.org/sites/cpan.perl.org/CPAN/modules/by-module/Chemistry/
  7. http://backpan.perl.org/modules/by-module/Chemistry/
  8. http://ftp.jaist.ac.jp/pub/CPAN/modules/by-module/Chemistry/
  9. http://ftp.twaren.net/Unix/Lang/CPAN/modules/by-module/Chemistry/
  10. https://cpan.metacpan.org/modules/by-module/
  11. https://cpan.metacpan.org/modules/by-module/Chemistry/
  12. https://www.cpan.org/modules/by-module/Chemistry/
Collapse this list.

Number of commits found: 18

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
07 Sep 2022 21:58:51
commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
0.39
07 Sep 2022 21:10:59
commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.39
20 Jul 2022 14:22:51
commit hash:46196047a4df0f85aaee442799209fdaacf03361commit hash:46196047a4df0f85aaee442799209fdaacf03361commit hash:46196047a4df0f85aaee442799209fdaacf03361commit hash:46196047a4df0f85aaee442799209fdaacf03361 files touched by this commit
Tobias C. Berner (tcberner) search for other commits by this committer
science: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Andreas Fehlner <fehlner@gmx.de>
  *  Brad Huntting <huntting@glarp.com>
  *  Chao Shin <quakelee@cn.FreeBSD.org>
  *  Cheng-Lung Sung <clsung@FreeBSD.org>
  *  Chia-Hsing Yu <me@davidyu.org>
  *  Chris Rees <utisoft@gmail.com>
  *  David Naylor <dbn@FreeBSD.org>
  *  Dmitry Sivachenko <demon@FreeBSD.org>
  *  Ed Schouten <ed@FreeBSD.org>
  *  Eric Freeman <freebsdports@chillibear.com>
  *  Erik B Knudsen
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.39
18 Jul 2022 12:40:14
commit hash:1e96d7880ed6a5ca5f760dac573754cc0e9d7943commit hash:1e96d7880ed6a5ca5f760dac573754cc0e9d7943commit hash:1e96d7880ed6a5ca5f760dac573754cc0e9d7943commit hash:1e96d7880ed6a5ca5f760dac573754cc0e9d7943 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
science/p5-Chemistry-Mol: Update to 0.39

Changes:	https://metacpan.org/dist/Chemistry-Mol/changes
0.38
14 Jul 2021 16:10:34
commit hash:e2b8c544c85932f5550195cadd50ccc838c61956commit hash:e2b8c544c85932f5550195cadd50ccc838c61956commit hash:e2b8c544c85932f5550195cadd50ccc838c61956commit hash:e2b8c544c85932f5550195cadd50ccc838c61956 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
science/p5-Chemistry-Mol: Sort PLIST
0.38
30 May 2021 19:55:14
commit hash:04bef3061aa5a264d337f3caccc341aa5f19e7c2commit hash:04bef3061aa5a264d337f3caccc341aa5f19e7c2commit hash:04bef3061aa5a264d337f3caccc341aa5f19e7c2commit hash:04bef3061aa5a264d337f3caccc341aa5f19e7c2 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
science/p5-Chemistry-Mol: Update to 0.38

Changes:	https://metacpan.org/changes/distribution/Chemistry-Mol
0.37_1
06 Apr 2021 14:31:07
commit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
0.37_1
06 Oct 2018 13:06:45
Revision:481365Original commit files touched by this commit
des search for other commits by this committer
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
for where it resulted in a change in output from build-depends-list or
run-depends-list.

Approved by:	portmgr (adamw)
0.37_1
26 Jun 2018 09:07:16
Revision:473377Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Add LICENSE
- Add NO_ARCH

Approved by:	portmgr blanket
0.37_1
27 May 2018 20:15:20
Revision:470993Original commit files touched by this commit
sunpoet search for other commits by this committer
Update WWW

search.cpan.org is shutting down.
It will redirect to metacpan.org after June 25, 2018.

With hat:	perl
0.37_1
01 Apr 2016 14:25:18
Revision:412349Original commit files touched by this commit
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
0.37_1
26 Nov 2014 13:08:38
Revision:373448Original commit files touched by this commit
mat search for other commits by this committer
Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.37
06 Nov 2013 01:32:12
Revision:332938Original commit files touched by this commit
vanilla search for other commits by this committer
Support STAGEDIR.
0.37
20 Sep 2013 22:48:31
Revision:327767Original commit files touched by this commit
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
0.37
02 Aug 2013 18:52:11
Revision:324174Original commit files touched by this commit
mat search for other commits by this committer
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
0.37
06 Dec 2012 02:12:53
Revision:308360Original commit files touched by this commit
wen search for other commits by this committer
- Trim Makefile headers
- Pass maintainership to perl@

Feature safe:	yes
> Description of fields to fill in above:                     76 columns --|
> PR:            If a GNATS PR is affected by the change.
> Submitted by:  If someone else sent in the change.
> Reviewed by:   If someone else reviewed your modification.
> Approved by:   If you needed approval for this commit.
> Obtained from: If the change is from a third party.
> MFC after:     N [day[s]|week[s]|month[s]].  Request a reminder email.
> Security:      Vulnerability reference (one per line) or description.
> Empty fields above will be automatically removed.

M    p5-Chemistry-Mol/Makefile
0.37
03 Jul 2011 13:22:25
Original commit files touched by this commit
ohauer search for other commits by this committer
 - remove MD5
0.37
16 May 2009 23:29:15
Original commit files touched by this commit
miwi search for other commits by this committer
Chemistr-Mol is a toolkit includes basic objects and methods to
describe molecules. It consists of several modules: Chemistry::Mol,
Chemistry::Atom, Chemistry::Bond, and Chemistry::File.

WWW: http://search.cpan.org/dist/Chemistry-Mol/

PR:             ports/134462
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 18