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Port details
gromacs Compute molecular dynamics
2022.2 science on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2004-10-19 01:46:50
Last Update: 2022-07-20 14:22:51
Commit Hash: 4619604
License: LGPL21
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
Expand this list (728 items)
Collapse this list.
  1. @ldconfig
  2. /usr/local/share/licenses/gromacs-2022.2/catalog.mk
  3. /usr/local/share/licenses/gromacs-2022.2/LICENSE
  4. /usr/local/share/licenses/gromacs-2022.2/LGPL21
  5. bin/GMXRC
  6. bin/GMXRC.bash
  7. bin/GMXRC.csh
  8. bin/GMXRC.zsh
  9. bin/demux.pl
  10. bin/gmx-completion-gmx_d.bash
  11. bin/gmx-completion.bash
  12. bin/gmx_d
  13. bin/xplor2gmx.pl
  14. include/gmxapi/compat/mdparams.h
  15. include/gmxapi/compat/tpr.h
  16. include/gmxapi/context.h
  17. include/gmxapi/exceptions.h
  18. include/gmxapi/gmxapi.h
  19. include/gmxapi/gmxapicompat.h
  20. include/gmxapi/gromacsfwd.h
  21. include/gmxapi/md.h
  22. include/gmxapi/md/mdmodule.h
  23. include/gmxapi/md/mdsignals.h
  24. include/gmxapi/mpi/gmxapi_mpi.h
  25. include/gmxapi/mpi/resourceassignment.h
  26. include/gmxapi/session.h
  27. include/gmxapi/session/resources.h
  28. include/gmxapi/status.h
  29. include/gmxapi/system.h
  30. include/gmxapi/version.h
  31. include/gromacs/analysisdata.h
  32. include/gromacs/analysisdata/abstractdata.h
  33. include/gromacs/analysisdata/analysisdata.h
  34. include/gromacs/analysisdata/arraydata.h
  35. include/gromacs/analysisdata/dataframe.h
  36. include/gromacs/analysisdata/datamodule.h
  37. include/gromacs/analysisdata/modules/average.h
  38. include/gromacs/analysisdata/modules/displacement.h
  39. include/gromacs/analysisdata/modules/histogram.h
  40. include/gromacs/analysisdata/modules/lifetime.h
  41. include/gromacs/analysisdata/modules/plot.h
  42. include/gromacs/external/boost/stl_interfaces/fwd.hpp
  43. include/gromacs/external/boost/stl_interfaces/iterator_interface.hpp
  44. include/gromacs/fileio/confio.h
  45. include/gromacs/fileio/filetypes.h
  46. include/gromacs/fileio/oenv.h
  47. include/gromacs/fileio/pdbio.h
  48. include/gromacs/fileio/tpxio.h
  49. include/gromacs/fileio/trxio.h
  50. include/gromacs/libgromacs_export.h
  51. include/gromacs/math/do_fit.h
  52. include/gromacs/math/functions.h
  53. include/gromacs/math/units.h
  54. include/gromacs/math/utilities.h
  55. include/gromacs/math/vec.h
  56. include/gromacs/math/vectypes.h
  57. include/gromacs/mdrun/simulationinputhandle.h
  58. include/gromacs/mdtypes/inputrec.h
  59. include/gromacs/mdtypes/md_enums.h
  60. include/gromacs/options.h
  61. include/gromacs/options/abstractoption.h
  62. include/gromacs/options/basicoptions.h
  63. include/gromacs/options/filenameoption.h
  64. include/gromacs/options/filenameoptionmanager.h
  65. include/gromacs/options/ioptionsbehavior.h
  66. include/gromacs/options/ioptionscontainer.h
  67. include/gromacs/options/ioptionscontainerwithsections.h
  68. include/gromacs/options/ivaluestore.h
  69. include/gromacs/options/optionfiletype.h
  70. include/gromacs/options/optionflags.h
  71. include/gromacs/options/options.h
  72. include/gromacs/options/timeunitmanager.h
  73. include/gromacs/pbcutil/pbc.h
  74. include/gromacs/restraint/restraintpotential.h
  75. include/gromacs/selection.h
  76. include/gromacs/selection/indexutil.h
  77. include/gromacs/selection/nbsearch.h
  78. include/gromacs/selection/position.h
  79. include/gromacs/selection/selection.h
  80. include/gromacs/selection/selectioncollection.h
  81. include/gromacs/selection/selectionenums.h
  82. include/gromacs/selection/selectionoption.h
  83. include/gromacs/selection/selectionoptionbehavior.h
  84. include/gromacs/selection/selectionoptionmanager.h
  85. include/gromacs/topology/atomprop.h
  86. include/gromacs/topology/atoms.h
  87. include/gromacs/topology/block.h
  88. include/gromacs/topology/forcefieldparameters.h
  89. include/gromacs/topology/idef.h
  90. include/gromacs/topology/ifunc.h
  91. include/gromacs/topology/index.h
  92. include/gromacs/topology/symtab.h
  93. include/gromacs/topology/topology.h
  94. include/gromacs/trajectory/trajectoryframe.h
  95. include/gromacs/trajectoryanalysis.h
  96. include/gromacs/trajectoryanalysis/analysismodule.h
  97. include/gromacs/trajectoryanalysis/analysissettings.h
  98. include/gromacs/trajectoryanalysis/cmdlinerunner.h
  99. include/gromacs/trajectoryanalysis/topologyinformation.h
  100. include/gromacs/utility/arrayref.h
  101. include/gromacs/utility/basedefinitions.h
  102. include/gromacs/utility/baseversion.h
  103. include/gromacs/utility/classhelpers.h
  104. include/gromacs/utility/current_function.h
  105. include/gromacs/utility/enumerationhelpers.h
  106. include/gromacs/utility/exceptions.h
  107. include/gromacs/utility/fileptr.h
  108. include/gromacs/utility/flags.h
  109. include/gromacs/utility/futil.h
  110. include/gromacs/utility/gmxassert.h
  111. include/gromacs/utility/listoflists.h
  112. include/gromacs/utility/pleasecite.h
  113. include/gromacs/utility/programcontext.h
  114. include/gromacs/utility/range.h
  115. include/gromacs/utility/real.h
  116. include/gromacs/utility/smalloc.h
  117. include/gromacs/utility/stringutil.h
  118. include/gromacs/utility/unique_cptr.h
  119. include/gromacs/version.h
  120. include/muParser.h
  121. include/muParserBase.h
  122. include/muParserBytecode.h
  123. include/muParserCallback.h
  124. include/muParserDLL.h
  125. include/muParserDef.h
  126. include/muParserError.h
  127. include/muParserFixes.h
  128. include/muParserInt.h
  129. include/muParserTemplateMagic.h
  130. include/muParserTest.h
  131. include/muParserToken.h
  132. include/muParserTokenReader.h
  133. include/nblib/basicdefinitions.h
  134. include/nblib/box.h
  135. include/nblib/exception.h
  136. include/nblib/gmxcalculatorcpu.h
  137. include/nblib/integrator.h
  138. include/nblib/interactions.h
  139. include/nblib/kerneloptions.h
  140. include/nblib/listed_forces/bondtypes.h
  141. include/nblib/listed_forces/calculator.h
  142. include/nblib/listed_forces/definitions.h
  143. include/nblib/molecules.h
  144. include/nblib/nblib.h
  145. include/nblib/nbnxmsetuphelpers.h
  146. include/nblib/particlesequencer.h
  147. include/nblib/particletype.h
  148. include/nblib/simulationstate.h
  149. include/nblib/topology.h
  150. include/nblib/tpr.h
  151. include/nblib/util/setup.h
  152. include/nblib/util/traits.hpp
  153. include/nblib/util/util.hpp
  154. include/nblib/vector.h
  155. lib/libgmxapi_d.so
  156. lib/libgmxapi_d.so.0
  157. lib/libgmxapi_d.so.0.3.1
  158. lib/libgromacs_d.so
  159. lib/libgromacs_d.so.7
  160. lib/libgromacs_d.so.7.0.0
  161. lib/libmuparser.so
  162. lib/libmuparser.so.2
  163. lib/libmuparser.so.2.3.2
  164. lib/libnblib_gmx.so
  165. lib/libnblib_gmx.so.0
  166. lib/libnblib_gmx.so.0.1.0
  167. libdata/pkgconfig/libgromacs_d.pc
  168. libdata/pkgconfig/muparser.pc
  169. share/cmake/gmxapi/gmxapi-config-version.cmake
  170. share/cmake/gmxapi/gmxapi-config.cmake
  171. share/cmake/gmxapi/gmxapi-release.cmake
  172. share/cmake/gmxapi/gmxapi.cmake
  173. share/cmake/gromacs_d/gromacs-hints_d.cmake
  174. share/cmake/gromacs_d/gromacs_d-config-version.cmake
  175. share/cmake/gromacs_d/gromacs_d-config.cmake
  176. share/cmake/gromacs_d/libgromacs-release.cmake
  177. share/cmake/gromacs_d/libgromacs.cmake
  178. share/gromacs/COPYING
  179. share/gromacs/README.tutor
  180. share/gromacs/README_FreeEnergyModifications.txt
  181. @comment share/gromacs/opencl/nbnxn_ocl_kernel_amd.clh
  182. @comment share/gromacs/opencl/nbnxn_ocl_kernel_nowarp.clh
  183. @comment share/gromacs/opencl/nbnxn_ocl_kernel_nvidia.clh
  184. @comment share/gromacs/opencl/nbnxn_ocl_kernel_pruneonly.clh
  185. @comment share/gromacs/opencl/nbnxn_ocl_kernel_utils.clh
  186. @comment share/gromacs/opencl/nbnxn_ocl_kernels.cl
  187. @comment share/gromacs/opencl/nbnxn_ocl_kernels.clh
  188. @comment share/gromacs/opencl/nbnxn_ocl_kernels_fastgen.clh
  189. @comment share/gromacs/opencl/nbnxn_ocl_kernels_fastgen_add_twincut.clh
  190. @comment share/gromacs/opencl/vectype_ops.clh
  191. share/gromacs/template/CMakeLists.txt
  192. share/gromacs/template/Makefile.pkg
  193. share/gromacs/template/README
  194. share/gromacs/template/cmake/FindGROMACS.cmake
  195. share/gromacs/template/template.cpp
  196. share/gromacs/top/README
  197. share/gromacs/top/amber03.ff/aminoacids.arn
  198. share/gromacs/top/amber03.ff/aminoacids.c.tdb
  199. share/gromacs/top/amber03.ff/aminoacids.hdb
  200. share/gromacs/top/amber03.ff/aminoacids.n.tdb
  201. share/gromacs/top/amber03.ff/aminoacids.r2b
  202. share/gromacs/top/amber03.ff/aminoacids.rtp
  203. share/gromacs/top/amber03.ff/aminoacids.vsd
  204. share/gromacs/top/amber03.ff/atomtypes.atp
  205. share/gromacs/top/amber03.ff/dna.arn
  206. share/gromacs/top/amber03.ff/dna.hdb
  207. share/gromacs/top/amber03.ff/dna.r2b
  208. share/gromacs/top/amber03.ff/dna.rtp
  209. share/gromacs/top/amber03.ff/ffbonded.itp
  210. share/gromacs/top/amber03.ff/ffnonbonded.itp
  211. share/gromacs/top/amber03.ff/forcefield.doc
  212. share/gromacs/top/amber03.ff/forcefield.itp
  213. share/gromacs/top/amber03.ff/ions.itp
  214. share/gromacs/top/amber03.ff/rna.arn
  215. share/gromacs/top/amber03.ff/rna.hdb
  216. share/gromacs/top/amber03.ff/rna.r2b
  217. share/gromacs/top/amber03.ff/rna.rtp
  218. share/gromacs/top/amber03.ff/spc.itp
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  222. share/gromacs/top/amber03.ff/tip4pew.itp
  223. share/gromacs/top/amber03.ff/tip5p.itp
  224. share/gromacs/top/amber03.ff/urea.itp
  225. share/gromacs/top/amber03.ff/watermodels.dat
  226. share/gromacs/top/amber94.ff/aminoacids.arn
  227. share/gromacs/top/amber94.ff/aminoacids.c.tdb
  228. share/gromacs/top/amber94.ff/aminoacids.hdb
  229. share/gromacs/top/amber94.ff/aminoacids.n.tdb
  230. share/gromacs/top/amber94.ff/aminoacids.r2b
  231. share/gromacs/top/amber94.ff/aminoacids.rtp
  232. share/gromacs/top/amber94.ff/aminoacids.vsd
  233. share/gromacs/top/amber94.ff/atomtypes.atp
  234. share/gromacs/top/amber94.ff/dna.arn
  235. share/gromacs/top/amber94.ff/dna.hdb
  236. share/gromacs/top/amber94.ff/dna.r2b
  237. share/gromacs/top/amber94.ff/dna.rtp
  238. share/gromacs/top/amber94.ff/ffbonded.itp
  239. share/gromacs/top/amber94.ff/ffnonbonded.itp
  240. share/gromacs/top/amber94.ff/forcefield.doc
  241. share/gromacs/top/amber94.ff/forcefield.itp
  242. share/gromacs/top/amber94.ff/ions.itp
  243. share/gromacs/top/amber94.ff/rna.arn
  244. share/gromacs/top/amber94.ff/rna.hdb
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  254. share/gromacs/top/amber94.ff/watermodels.dat
  255. share/gromacs/top/amber96.ff/aminoacids.arn
  256. share/gromacs/top/amber96.ff/aminoacids.c.tdb
  257. share/gromacs/top/amber96.ff/aminoacids.hdb
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  260. share/gromacs/top/amber96.ff/aminoacids.rtp
  261. share/gromacs/top/amber96.ff/aminoacids.vsd
  262. share/gromacs/top/amber96.ff/atomtypes.atp
  263. share/gromacs/top/amber96.ff/dna.arn
  264. share/gromacs/top/amber96.ff/dna.hdb
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  267. share/gromacs/top/amber96.ff/ffbonded.itp
  268. share/gromacs/top/amber96.ff/ffnonbonded.itp
  269. share/gromacs/top/amber96.ff/forcefield.doc
  270. share/gromacs/top/amber96.ff/forcefield.itp
  271. share/gromacs/top/amber96.ff/ions.itp
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  284. share/gromacs/top/amber99.ff/aminoacids.arn
  285. share/gromacs/top/amber99.ff/aminoacids.c.tdb
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  289. share/gromacs/top/amber99.ff/aminoacids.rtp
  290. share/gromacs/top/amber99.ff/aminoacids.vsd
  291. share/gromacs/top/amber99.ff/atomtypes.atp
  292. share/gromacs/top/amber99.ff/dna.arn
  293. share/gromacs/top/amber99.ff/dna.hdb
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  295. share/gromacs/top/amber99.ff/dna.rtp
  296. share/gromacs/top/amber99.ff/ffbonded.itp
  297. share/gromacs/top/amber99.ff/ffnonbonded.itp
  298. share/gromacs/top/amber99.ff/forcefield.doc
  299. share/gromacs/top/amber99.ff/forcefield.itp
  300. share/gromacs/top/amber99.ff/ions.itp
  301. share/gromacs/top/amber99.ff/rna.arn
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  312. share/gromacs/top/amber99.ff/watermodels.dat
  313. share/gromacs/top/amber99sb-ildn.ff/aminoacids.arn
  314. share/gromacs/top/amber99sb-ildn.ff/aminoacids.c.tdb
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  342. share/gromacs/top/amber99sb.ff/aminoacids.arn
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  356. share/gromacs/top/amber99sb.ff/forcefield.doc
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  712. share/man/man1/gmx-traj.1.gz
  713. share/man/man1/gmx-trajectory.1.gz
  714. share/man/man1/gmx-trjcat.1.gz
  715. share/man/man1/gmx-trjconv.1.gz
  716. share/man/man1/gmx-trjorder.1.gz
  717. share/man/man1/gmx-tune_pme.1.gz
  718. share/man/man1/gmx-vanhove.1.gz
  719. share/man/man1/gmx-velacc.1.gz
  720. share/man/man1/gmx-view.1.gz
  721. share/man/man1/gmx-wham.1.gz
  722. share/man/man1/gmx-wheel.1.gz
  723. share/man/man1/gmx-x2top.1.gz
  724. share/man/man1/gmx-xpm2ps.1.gz
  725. share/man/man1/gmx.1.gz
  726. @owner
  727. @group
  728. @mode
Collapse this list.
Dependency lines:
  • gromacs>0:science/gromacs
To install the port:
cd /usr/ports/science/gromacs/ && make install clean
To add the package, run one of these commands:
  • pkg install science/gromacs
  • pkg install gromacs
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: gromacs
Flavors: there is no flavor information for this port.
distinfo:
Packages (timestamps in pop-ups are UTC):
gromacs
ABIlatestquarterly
FreeBSD:11:aarch642018.3_12020.2
FreeBSD:11:amd642021.32021.2
FreeBSD:11:armv65.0.62020.2
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch642018.3_12022.2
FreeBSD:12:amd642022.22022.2
FreeBSD:12:armv62018.3_12020.3
FreeBSD:12:armv72018.3_12020.3
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch642022.22022.2
FreeBSD:13:amd642022.22022.2
FreeBSD:13:armv62020.5-
FreeBSD:13:armv72022.22022.2
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc642020.4_22021.2
FreeBSD:13:riscv64--
FreeBSD:14:aarch642022.2-
FreeBSD:14:amd642022.2-
FreeBSD:14:armv6--
FreeBSD:14:armv72022.2-
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc642021.1-
FreeBSD:14:riscv64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. boost-libs>=1.44 : devel/boost-libs
  2. cmake : devel/cmake
  3. gfortran11 : lang/gcc11
  4. pkgconf>=1.3.0_1 : devel/pkgconf
  5. python3.9 : lang/python39
  6. as : devel/binutils
  7. perl5>=5.32.r0<5.33 : lang/perl5.32
  8. ice.pc : x11/libICE
  9. sm.pc : x11/libSM
  10. xext.pc : x11/libXext
  11. x11.pc : x11/libX11
Runtime dependencies:
  1. gfortran11 : lang/gcc11
  2. perl5>=5.32.r0<5.33 : lang/perl5.32
  3. ice.pc : x11/libICE
  4. sm.pc : x11/libSM
  5. xext.pc : x11/libXext
  6. x11.pc : x11/libX11
Library dependencies:
  1. libhwloc.so : devel/hwloc2
  2. libfftw3.so : math/fftw3
  3. libxml2.so : textproc/libxml2
  4. libblas.so : math/blas
  5. liblapack.so : math/lapack
This port is required by:
for Libraries
  1. science/votca

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. ftp://ftp.gromacs.org/pub/gromacs/
Collapse this list.

Number of commits found: 137 (showing only 100 on this page)

1 | 2  »  

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
20 Jul 2022 14:22:51
 files touched by this commit commit hash:46196047a4df0f85aaee442799209fdaacf03361  2022.2
Tobias C. Berner (tcberner) search for other commits by this committer
science: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Andreas Fehlner <fehlner@gmx.de>
  *  Brad Huntting <huntting@glarp.com>
  *  Chao Shin <quakelee@cn.FreeBSD.org>
  *  Cheng-Lung Sung <clsung@FreeBSD.org>
  *  Chia-Hsing Yu <me@davidyu.org>
  *  Chris Rees <utisoft@gmail.com>
  *  David Naylor <dbn@FreeBSD.org>
  *  Dmitry Sivachenko <demon@FreeBSD.org>
  *  Ed Schouten <ed@FreeBSD.org>
  *  Eric Freeman <freebsdports@chillibear.com>
  *  Erik B Knudsen
(Only the first 15 lines of the commit message are shown above View all of this commit message)
07 Jul 2022 06:45:25
 files touched by this commit commit hash:75adb635f91f77275dbb98f07cb940de29ee774c  2022.2
Yuri Victorovich (yuri) search for other commits by this committer
science/gromacs: Change WWW to https
17 Jun 2022 17:05:29
 files touched by this commit commit hash:1508a7e9850a2637c2aafc37d3a5d7a0e497c2f6  2022.2
Yuri Victorovich (yuri) search for other commits by this committer
science/gromacs: Update 2022.1 -> 2022.2

Reported by:	portscout
16 May 2022 06:49:43
 files touched by this commit commit hash:2d34c2bfeaa82867acfa7d73bec9644b2acecbb1  2022.1
Loïc Bartoletti (lbartoletti) search for other commits by this committer
devel/cmake: Update to 3.23.0

Update to 3.23.0.
Fix pkg-plist: using the default share/man location

Release Notes:
  https://cmake.org/cmake/help/v3.23/release/3.23.html

PR:		262886
Exp-run by:	antoine
28 Apr 2022 03:39:22
 files touched by this commit commit hash:ffecb994225660a18261a51e4847606f0973d62d  2022.1
Yuri Victorovich (yuri) search for other commits by this committer
science/gromacs: Update 2021.5 -> 2022.1

Reported by:	portscout
10 Apr 2022 19:11:41
 files touched by this commit commit hash:d63665f7cd9c99880704a3c5bc221829cb009744  2021.5_2
Charlie Li (vishwin) search for other commits by this committer
textproc/libxml2: bump all LIB_DEPENDS consumers

This is a separate commit to facilitate easier cherry-picking for
quarterly.

PR: 262853, 262940, 262877, 263126
Approved by: fluffy (mentor)
26 Mar 2022 08:27:27
 files touched by this commit commit hash:247c7db7513f1264922428278678da641c5a3f52  2021.5_1
Matthias Fechner (mfechner) search for other commits by this committer
textproc/libxml2: bump all dependencies

This should make sure that all dependent ports will pick
up the new version commited with a13ec21cd733f67a9fc0dc00ab45268bdc236246
15 Jan 2022 22:50:02
 files touched by this commit commit hash:72fdfab1e56f7bb5b4970d603d312d96e8f34cbe  2021.5
Yuri Victorovich (yuri) search for other commits by this committer
science/gromacs: Update 2021.4 -> 2021.5

Reported by:	portscout
08 Nov 2021 09:05:21
 files touched by this commit commit hash:9eea5342606285225e90f7a1e0a9d8464a618cce  2021.4
Yuri Victorovich (yuri) search for other commits by this committer
science/gromacs: Update 2021.3 -> 2021.4

Reported by:	portscout
19 Aug 2021 18:04:44
 files touched by this commit commit hash:f1a67e35630a72d8c324ecef62f7c6a54582f037  2021.3
Yuri Victorovich (yuri) search for other commits by this committer
science/gromacs: Update 2021.2 -> 2021.3

Reported by:	portscout
07 May 2021 03:44:01
 files touched by this commit commit hash:d9c82e0c9519df0cdecae81d5aba7a9251264d88  2021.2
Yuri Victorovich (yuri) search for other commits by this committer
science/gromacs: Update 2021.1 -> 2021.2

Reported by:	portscout
15 Apr 2021 08:31:56
 files touched by this commit commit hash:ffbc3bd9376a3672e16eafddf55b233b8fed1674  2021.1
Tobias Kortkamp (tobik) search for other commits by this committer
Clean up some things

- Remove duplicate variables
- Remove nop variables
- Sort categories
- Remove redundant option descriptions that match the default ones

Reported by:	portscan
06 Apr 2021 14:31:07
 files touched by this commit commit hash:305f148f482daf30dcf728039d03d019f88344eb  2021.1
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
09 Mar 2021 05:11:29
Original commit files touched by this commit Revision:567890  2021.1
yuri search for other commits by this committer
science/gromacs: Update 2021 -> 2021.1
18 Feb 2021 20:43:09
Original commit files touched by this commit Revision:565980  2021
yuri search for other commits by this committer
science/gromacs: Update 2020.5 -> 2021
09 Jan 2021 10:33:49
Original commit files touched by this commit Revision:560845  2020.5
yuri search for other commits by this committer
science/gromacs: Update 2020.4 -> 2020.5

Reported by:	portscout
08 Jan 2021 20:44:02
Original commit files touched by this commit Revision:560810  2020.4_2
jwb search for other commits by this committer
science/gromacs: Upgrade hwloc dep to hwloc2

hwloc2 conflicts with hwloc, so updating all dependents ASAP.

PR:             252526
Submitted by:   jwb
Approved by:    yuri
18 Dec 2020 05:40:05
Original commit files touched by this commit Revision:558350  2020.4_2
yuri search for other commits by this committer
science/gromacs: Turn the option FLOAT to OFF by default

This is because FLOAT=ON reduces fp accuracy, this probably shouldn't be the
default.
Also because its only user in the ports tree, science/votca, needs double fp
precision.
18 Dec 2020 01:21:01
Original commit files touched by this commit Revision:558341  2020.4_1
yuri search for other commits by this committer
science/gromacs: Add the LEGACY option that installs legacy API needed by some
users
12 Oct 2020 00:52:42
Original commit files touched by this commit Revision:552085  2020.4
yuri search for other commits by this committer
science/gromacs: Update 2020.3 -> 2020.4

Reported by:	portscout
16 Jul 2020 06:32:45
Original commit files touched by this commit Revision:542327  2020.3
yuri search for other commits by this committer
science/gromacs: Update 2020.2 -> 2020.3

Reported by:	portscout
05 May 2020 01:20:19
Original commit files touched by this commit Revision:534005  2020.2
yuri search for other commits by this committer
science/gromacs: Fix plist when MPI=on
01 May 2020 06:27:58
Original commit files touched by this commit Revision:533514  2020.2
yuri search for other commits by this committer
science/gromacs: Update 2020.1 -> 2020.2

Reported by:	portscout
19 Apr 2020 09:49:02
Original commit files touched by this commit Revision:532095  2020.1_3
danilo search for other commits by this committer
- Update net/openmpi to 4.0.3 (openmpi 1 is deprecated)
- Remove option for net/openmpi2 from science/pnetcdf (net/openmpi2 is
deprecated and will be removed)
- Fix science/gromacs plist when MPI option is enabled
- Bump PORTREVISION for all the consumers of net/openmpi
31 Mar 2020 16:15:17
Original commit files touched by this commit Revision:529986  2020.1_2
rene search for other commits by this committer
Clean up ports after FreeBSD 12.0 reached end-of-life.

emulators/mesen is left out for now, as it breaks on 11.3

Submitted by:	rene
Reviewed by:	jbeich, zeising
X-Differential Revision:	https://reviews.freebsd.org/D24211
08 Mar 2020 21:56:37
Original commit files touched by this commit Revision:528082  2020.1_1
jbeich search for other commits by this committer
Drop dependency on devel/openmp

- Drop if devel/llvm* was used as a substitute

Approved by:	yuri, rene (earlier version)
Differential Revision:	https://reviews.freebsd.org/D23020
04 Mar 2020 15:53:04
Original commit files touched by this commit Revision:527766  2020.1
yuri search for other commits by this committer
science/gromacs: Update 2020 -> 2020.1

Reported by:	portscout
05 Feb 2020 17:35:05
Original commit files touched by this commit Revision:525285  2020_1
antoine search for other commits by this committer
Don't both set compiler + USES=compiler
05 Feb 2020 15:52:42
Original commit files touched by this commit Revision:525280  2020_1
yuri search for other commits by this committer
science/gromacs: Fix build on systems with older clang (clang-6)

Reported by:	fallout
30 Jan 2020 14:17:44
Original commit files touched by this commit Revision:524642  2020_1
swills search for other commits by this committer
Fix math/openblas and bump dependent ports

* Fix build on i386 [1]
* Fix science/code_saturne build with new openblas [2]
* Avoid installing private headers [3]
* Prevent build from optimizing for host by correcting build confg [4]
* Bump portrevision of dependent ports [5]

This is correcting issues from r523749 [1][2][4] and r515970 [3]

PR:		231371
Reported by:	build cluster [1]
Reported by:	Dima Pasechnik <dimpase+freebsd@gmail.com> [2]
Reported by:	many [5]
Reviewed by:	mat, bapt
Approved by:	implicit, since this is a build fix
30 Jan 2020 09:49:50
Original commit files touched by this commit Revision:524639  2020
yuri search for other commits by this committer
science/gromacs: Change compiler requirement to c++14 along the flags that the
project supplies.

Reported by:	fallout
12 Jan 2020 01:13:06
Original commit files touched by this commit Revision:522739  2020
yuri search for other commits by this committer
science/gromacs: Update 2019.5 -> 2020

Reported by:	repology
24 Dec 2019 07:45:13
Original commit files touched by this commit Revision:520781  2019.5
yuri search for other commits by this committer
science/gromacs: Update 2019.4 -> 2019.5

Reported by:	portscout
11 Dec 2019 17:53:49
Original commit files touched by this commit Revision:519824  2019.4_1
jbeich search for other commits by this committer
devel/boost-*: update to 1.72.0

Changes:	http://www.boost.org/users/history/version_1_72_0.html
PR:		241449
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D22136
05 Oct 2019 22:57:39
Original commit files touched by this commit Revision:513855  2019.4
yuri search for other commits by this committer
science/gromacs: Update 2019.3 -> 2019.4

Reported by:	portscout
21 Sep 2019 18:59:57
Original commit files touched by this commit Revision:512535  2019.3_3
jbeich search for other commits by this committer
devel/openmp: update to 9.0.0

- Connect tests to the framework to help QA remaining patches
- Force rebuild all consumers after https://reviews.llvm.org/D59783

Changes:	http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log
ABI:		https://abi-laboratory.pro/tracker/timeline/llvm_openmp/
19 Aug 2019 15:35:28
Original commit files touched by this commit Revision:509290  2019.3_2
jbeich search for other commits by this committer
devel/boost-*: update to 1.71.0

Changes:	http://www.boost.org/users/history/version_1_71_0.html
PR:		238827
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D20774
26 Jul 2019 20:46:57
Original commit files touched by this commit Revision:507372  2019.3_1
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
15 Jun 2019 19:35:27
Original commit files touched by this commit Revision:504264  2019.3
yuri search for other commits by this committer
science/gromacs: Update 2019.2 -> 2019.3

Reported by:	portscout
08 May 2019 16:05:53
Original commit files touched by this commit Revision:501030  2019.2_2
jbeich search for other commits by this committer
devel/openmp: phase out

- Expire after the last version without /usr/lib/libomp.so
- Drop SOVERSION for seamless transition (i.e., avoid conditionals)

PR:		236907
Approved by:	bapt (maintainer)
Differential Revision:	https://reviews.freebsd.org/D19767
28 Apr 2019 08:30:15
Original commit files touched by this commit Revision:500294  2019.2_1
yuri search for other commits by this committer
science/gromacs: Broken on i386

Reported by:	fallout
22 Apr 2019 13:16:34
Original commit files touched by this commit Revision:499638  2019.2_1
gerald search for other commits by this committer
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.

Suggested by:	tijl
20 Apr 2019 15:47:28
Original commit files touched by this commit Revision:499453  2019.2
yuri search for other commits by this committer
science/gromacs: Update 2019.1 -> 2019.2

Reported by:	portscout
12 Apr 2019 06:36:31
Original commit files touched by this commit Revision:498698  2019.1_1
jbeich search for other commits by this committer
devel/boost-*: update to 1.70.0

Changes:	http://www.boost.org/users/history/version_1_70_0.html
PR:		235956
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D19303
17 Feb 2019 02:32:08
Original commit files touched by this commit Revision:493145  2019.1
yuri search for other commits by this committer
science/gromacs: Update 2019 -> 2019.1

Reported by:	portscout
22 Jan 2019 02:02:15
Original commit files touched by this commit Revision:490922  2019
yuri search for other commits by this committer
science/gromacs: Update 2018.4 -> 2019

Reported by:	repology
25 Dec 2018 20:25:40
Original commit files touched by this commit Revision:488341  2018.4_2
tcberner search for other commits by this committer
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
12 Dec 2018 01:35:36
Original commit files touched by this commit Revision:487272  2018.4_2
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
12 Dec 2018 00:15:50
Original commit files touched by this commit Revision:487266  2018.4_1
jbeich search for other commits by this committer
devel/boost-*: update to 1.69.0

Changes:	http://www.boost.org/users/history/version_1_69_0.html
PR:		232525
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D17645
15 Nov 2018 02:22:10
Original commit files touched by this commit Revision:484990  2018.4
yuri search for other commits by this committer
science/gromacs: Update 2018.3 -> 2018.4

Reported by:	portscout
05 Nov 2018 23:51:03
Original commit files touched by this commit Revision:484261  2018.3_1
linimon search for other commits by this committer
Add compiler:c++11-lang to USES to fix build on gcc-based archs.

Approved by:	portmgr (tier-2 blanket)
22 Sep 2018 16:36:38
Original commit files touched by this commit Revision:480395  2018.3_1
yuri search for other commits by this committer
Change 20 ports from net/mpich2 to net/mpich

mpich2 is the obsolete version 2.x, mpich is at the current version 3.x

Ports:
math/scalapack science/nwchem science/quantum-espresso science/qmcpack
science/madness
science/qbox science/openmx science/jdftx science/fleur science/libgridxc
science/mdynamix science/lm science/dftbplus science/py-gpaw devel/ga
math/elpa net/charm science/gromacs math/pari math/arpack-ng-mpich
24 Aug 2018 17:52:09
Original commit files touched by this commit Revision:477971  2018.3
yuri search for other commits by this committer
science/gromacs: Update 2018.2 -> 2018.3

Reported by:	portscout
09 Aug 2018 06:58:31
Original commit files touched by this commit Revision:476723  2018.2_3
jbeich search for other commits by this committer
devel/boost-*: update to 1.68.0

- Switch to C++14 for libboost_system to support C++14 consumers

Changes:	http://www.boost.org/users/history/version_1_68_0.html
PR:		229569
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D16165
29 Jul 2018 22:18:46
Original commit files touched by this commit Revision:475857  2018.2_2
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542
16 Jun 2018 21:07:11
Original commit files touched by this commit Revision:472566  2018.2_1
yuri search for other commits by this committer
science/gromacs: Chase the changed tarball

The upstream "rerelased" 2018.2, so updating the port.

Reported by:	fallout
14 Jun 2018 08:17:41
Original commit files touched by this commit Revision:472367  2018.2
yuri search for other commits by this committer
science/gromacs: Update 2018.1 -> 2018.2

Reported by:	portscout
19 Apr 2018 08:04:10
Original commit files touched by this commit Revision:467753  2018.1
yuri search for other commits by this committer
science/gromacs: Update 5.0.6 -> 2018.1

Port changes:
* Take maintainership.
* Modernize the port, now using option helpers.
* Add the OPENCL option.
* Add the THREAD_MPI option that is now the default multiprocessing option.
* Add missing dependencies.
18 Apr 2018 13:57:43
Original commit files touched by this commit Revision:467711  5.0.6_12
jbeich search for other commits by this committer
devel/boost-*: update to 1.67.0

Changes:	http://www.boost.org/users/history/version_1_67_0.html
PR:		227427
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D15030
10 Mar 2018 17:46:06
Original commit files touched by this commit Revision:464084  5.0.6_11
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
18 Jan 2018 04:11:03
Original commit files touched by this commit Revision:459315  5.0.6_10
jbeich search for other commits by this committer
devel/boost-*: update to 1.66.0

Changes:	http://www.boost.org/users/history/version_1_66_0.html
PR:		223922
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D13279
25 Sep 2017 00:08:17
Original commit files touched by this commit Revision:450560  5.0.6_9
jbeich search for other commits by this committer
devel/boost-*: update to 1.65.1

Changes:	http://www.boost.org/users/history/version_1_65_1.html
PR:		218835
Approved by:	maintainer timeout (1.65.1: 2 weeks; 1.65.0: 1 month)
Tested by:	jhibbits (on powerpc64, earlier version)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D11582
25 Sep 2017 00:05:06
Original commit files touched by this commit Revision:450557  5.0.6_8
jbeich search for other commits by this committer
devel/boost-*: enable C++11 features

PR:		218835
Obtained from:	https://github.com/DragonFlyBSD/DeltaPorts/pull/690
Approved by:	maintainer timeout (2 months)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D11582
10 Sep 2017 20:55:39
Original commit files touched by this commit Revision:449591  5.0.6_7
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275
02 May 2017 06:48:11
Original commit files touched by this commit Revision:439934  5.0.6_6
jbeich search for other commits by this committer
devel/boost-*: update to 1.64.0

Changes:	http://www.boost.org/users/history/version_1_64_0.html
PR:		218835
Approved by:	office (bapt)
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D10472
01 Apr 2017 15:23:32
Original commit files touched by this commit Revision:437439  5.0.6_5
gerald search for other commits by this committer
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707
06 Jan 2017 08:45:04
Original commit files touched by this commit Revision:430692  5.0.6_4
jbeich search for other commits by this committer
devel/boost-*: update to 1.63.0

Changes:	http://www.boost.org/users/history/version_1_63_0.html
PR:		215598
Exp-run by:	antoine
Approved by:	office (bapt)
MFH:		2017Q1
26 Dec 2016 11:59:12
Original commit files touched by this commit Revision:429499  5.0.6_3
rene search for other commits by this committer
Reset ports per maintainer request.

PR:		215557
Submitted by:	A.J. "Fonz" van Werven (maintainer)
07 Dec 2016 13:24:57
Original commit files touched by this commit Revision:428057  5.0.6_3
gerald search for other commits by this committer
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms), part II.

The first part covered  ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.

This adds ports with USES=fortran and ports using Mk/bsd.octave.mk
which in turn has USES=fortran.

PR:		214965
Reported by:	thierry
23 Nov 2016 12:45:47
Original commit files touched by this commit Revision:426908  5.0.6_2
jbeich search for other commits by this committer
devel/boost-*: update to 1.62.0

- Enable `long double` C99 math usage
- Switch 9.x back to building with GCC

Changes:	http://www.boost.org/users/history/
PR:		199601
Submitted by:	Chen Xu, bapt, amdmi3, truckman (based on)
Reviewed by:	rakuco (kde) (earlier version)
Exp-run by:	antoine (3 tries), truckman (consumers only, earlier versions)
Approved by:	bapt (office)
20 Nov 2016 09:38:09
Original commit files touched by this commit Revision:426566  5.0.6_1
gerald search for other commits by this committer
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

In particular that is ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
01 Apr 2016 14:25:18
Original commit files touched by this commit Revision:412349  5.0.6
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u.

With hat:	portmgr
Sponsored by:	Absolight
16 Aug 2015 21:31:42
Original commit files touched by this commit Revision:394419  5.0.6
amdmi3 search for other commits by this committer
- Update to 5.0.6
- Pass maintainership to submitter
- Add distfile mirror

PR:		201921
Submitted by:	freebsd@skysmurf.nl
19 May 2015 01:59:50
Original commit files touched by this commit Revision:386731  5.0.5
wen search for other commits by this committer
- Update to 5.0.5

PR:		200306
Submitted by:	tkato432@yahoo.com
17 Feb 2015 01:46:25
Original commit files touched by this commit Revision:379134  5.0.4
vanilla search for other commits by this committer
Upgrade to 5.0.4.

PR:		197454
Submitted by:	Ports Fury.
03 Feb 2015 15:09:57
Original commit files touched by this commit Revision:378358  5.0.2_1
thierry search for other commits by this committer
Uses blaslapack.
26 Dec 2014 14:24:13
Original commit files touched by this commit Revision:375624  5.0.2_1
danilo search for other commits by this committer
- Update net/openmpi to 1.8.4
30 Oct 2014 12:19:02
Original commit files touched by this commit Revision:371747  5.0.2
wen search for other commits by this committer
- Update to 5.0.2

PR:		193902
Submitted by:	tkato432@yahoo.com
20 Oct 2014 13:09:42
Original commit files touched by this commit Revision:371267  5.0_5
marino search for other commits by this committer
science/gromacs: Fix build on DragonFly (fix from dports)
28 Sep 2014 03:41:25
Original commit files touched by this commit Revision:369434  5.0_5
danilo search for other commits by this committer
- Update net/openmpi from 1.8.2 to 1.8.3
10 Sep 2014 20:50:37
Original commit files touched by this commit Revision:367888  5.0_4
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
01 Sep 2014 21:50:15
Original commit files touched by this commit Revision:366964  5.0_3
thierry search for other commits by this committer
- Upgrade to 1.5;

- Bump PORTREVISION for consumers.
31 Aug 2014 16:36:23
Original commit files touched by this commit Revision:366788  5.0_2
tijl search for other commits by this committer
math/fftw3:
- Add USES=libtool and bump dependent ports
- Add INSTALL_TARGET=install-strip
- Remove PTHREAD_CFLAGS and PTHREAD_LIBS
- Use MAKE_CMD
26 Aug 2014 19:55:00
Original commit files touched by this commit Revision:366262  5.0_1
thierry search for other commits by this committer
Chase the upgrade of net/mpich2.

Approved by:	portmgr (non staged ports)
10 Aug 2014 00:03:09
Original commit files touched by this commit Revision:364488  5.0
marino search for other commits by this committer
science/gromacs: Upgrade version 4.6.5 => 5.0

PR:		191826
Submitted by:	Ports Fury
14 Jul 2014 16:51:45
Original commit files touched by this commit Revision:361800  4.6.5_3
tijl search for other commits by this committer
- Convert net/openmpi to USES=libtool and bump dependent ports
- Add INSTALL_TARGET=install-strip
- Use BROKEN_sparc64

Approved by:	portmgr (implicit, bump unstaged port)
06 Jul 2014 09:09:15
Original commit files touched by this commit Revision:360865  4.6.5_2
marino search for other commits by this committer
science/gromacs: Add DragonFly support (dports)
10 Mar 2014 20:55:22
Original commit files touched by this commit Revision:347809  4.6.5_2
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
27 Dec 2013 16:39:53
Original commit files touched by this commit Revision:337747  4.6.5_1
tijl search for other commits by this committer
- USES=fortran.
- Fix detection of dlopen(3) to support plugins from science/vmd.
17 Dec 2013 20:36:38
Original commit files touched by this commit Revision:336762  4.6.5
danilo search for other commits by this committer
- Update from 4.6.4 to 4.6.5 [1]
- Convert some "if's" in options helpers

PR:		ports/184903
Submitted by:	KATO Tsuguru <tkato432@yahoo.com> [1]
26 Nov 2013 17:45:42
Original commit files touched by this commit Revision:334960  4.6.4
wg search for other commits by this committer
science/gromacs: Update to version 4.6.4

- Update to version 4.6.4
- Allow staging

PR:		ports/184224
Submitted by:	KATO Tsuguru <tkato432 yahoo.com>
26 Oct 2013 00:52:36
Original commit files touched by this commit Revision:331644  4.6.3_2
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit Revision:327767  4.6.3_1
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
26 Aug 2013 16:06:38
Original commit files touched by this commit Revision:325401  4.6.3_1
bf search for other commits by this committer
Update math/gsl to 1.16 and adjust some dependent ports
14 Aug 2013 22:35:54
Original commit files touched by this commit Revision:324744  4.6.3  Sanity Test Failure
ak search for other commits by this committer
- Remove MAKE_JOBS_SAFE variable

Approved by:	portmgr (bdrewery)
03 Aug 2013 08:45:52
Original commit files touched by this commit Revision:324181  4.6.3
az search for other commits by this committer
- Convert to new perl framework
- Trim Makefile header
15 Jul 2013 14:38:37
Original commit files touched by this commit Revision:323034  4.6.3
miwi search for other commits by this committer
- Update to 4.6.3

PR:		180503
Submitted by:	Ports Fury
04 Jun 2013 08:19:33
Original commit files touched by this commit Revision:319827  4.6.2
miwi search for other commits by this committer
- Update to 4.6.2

PR:		179208
Submitted by:	Ports Fury
23 Apr 2013 14:20:28
Original commit files touched by this commit Revision:316355  4.6.1
bapt search for other commits by this committer
Finish converting the whole ports tree to USES=pkgconfig
24 Mar 2013 16:27:23
Original commit files touched by this commit Revision:315145  4.6.1
miwi search for other commits by this committer
- Update to 4.6.1

PR:		177243
Submitted by:	ports fury

Number of commits found: 137 (showing only 100 on this page)

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