| Port details |
- py-rpy2 Python interface to the R Programming Language
- 3.5.1_1 math
 =0      3.4.5_1Version of this port present on the latest quarterly branch. - Maintainer: sunpoet@FreeBSD.org
- Port Added: 2018-09-01 14:55:57
- Last Update: 2022-05-13 11:39:34
- Commit Hash: 43b5784
- Also Listed In: python
- License: GPLv2+
- Description:
- RPy is a very simple, yet robust, Python interface to the R Programming
Language. It can manage all kinds of R objects and can execute arbitrary R
functions (including the graphic functions). All the errors from the R language
are converted to Python exceptions. Any module that later were installed on the
R system, can easily be used from within Python, without introducing any
changes.
rpy2 is a redesign and rewrite of rpy. It is providing a low-level interface to
R, a proposed high-level interface, including wrappers to graphical libraries,
as well as R-like structures and functions.
WWW: https://rpy2.bitbucket.io/
- SVNWeb : git : Homepage
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}rpy2>0:math/py-rpy2@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/math/py-rpy2/ && make install clean
- To add the package, run one of these commands:
- pkg install math/py-rpy2
- pkg install py38-rpy2
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.NOTE: This is a Python port. Instead of py38-rpy2 listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py38-rpy2
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1650228802
SHA256 (rpy2-3.5.1.tar.gz) = d35717489bd0754b556202a6b990ebc6f3a1c18c9c23b3a862a46a91fc265805
SIZE (rpy2-3.5.1.tar.gz) = 201742
- Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py38-cffi>=1.10.0 : devel/py-cffi@py38
- gfortran10 : lang/gcc10
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- as : devel/binutils
- Runtime dependencies:
-
- py38-cffi>=1.10.0 : devel/py-cffi@py38
- py38-Jinja2>=0 : devel/py-Jinja2@py38
- py38-pytz>=0,1,1 : devel/py-pytz@py38
- py38-tzlocal>=0 : devel/py-tzlocal@py38
- py38-pandas>=0,1 : math/py-pandas@py38
- py38-numpy>=0,1 : math/py-numpy@py38
- py38-pandas>=0,1 : math/py-pandas@py38
- gfortran10 : lang/gcc10
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- Library dependencies:
-
- libR.so : math/R
- libicui18n.so : devel/icu
- libpcre2-8.so : devel/pcre2
- libreadline.so.8 : devel/readline
- This port is required by:
- for Build
-
- math/sage
- for Run
-
- math/sage
- Configuration Options:
- ===> The following configuration options are available for py38-rpy2-3.5.1_1:
NUMPY=on: Numpy support
PANDAS=on: Pandas support
===> Use 'make config' to modify these settings
- Options name:
- math_py-rpy2
- USES:
- compiler:c11 fortran python:3.7+ readline
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
| Commit History - (may be incomplete: see SVNWeb link above for full details) |
| Date | By | Description |
|---|
13 May 2022 11:39:34
  3.5.1_1
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Fix LIB_DEPENDS
- Bump PORTREVISION for dependency change
math/R has been changed to pcre2 since 4.0.0
(a0a98863caa692b26f90ee45a3cda113bc4e1abf). |
17 Apr 2022 23:58:21
3.5.1
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Update to 3.5.1
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
16 Apr 2022 04:19:25
3.5.0
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Update to 3.5.0
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
07 Apr 2022 00:39:10
3.4.5_2
|
Jan Beich (jbeich) |
devel/icu: update to 71.1
Changes: https://github.com/unicode-org/icu/releases/tag/release-71-1
Reported by: GitHub (watch releases)
PR: 262654
Exp-run by: antoine
Approved by: fluffy |
28 Oct 2021 16:37:30
3.4.5_1
|
Jan Beich (jbeich) |
devel/icu: update to 70.1
Changes: https://github.com/unicode-org/icu/releases/tag/release-70-1
Reported by: GitHub (watch releases)
PR: 258794
Exp-run by: antoine |
25 Oct 2021 15:57:33
3.4.5
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Cosmetic change |
14 Jun 2021 17:40:18
3.4.5
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Update to 3.4.5
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
29 Apr 2021 14:23:58
3.4.4
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Add CATEGORIES=python |
25 Apr 2021 20:35:32
3.4.4
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Update to 3.4.4
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
18 Apr 2021 05:43:53
3.4.3
|
Po-Chuan Hsieh (sunpoet) |
math/py-rpy2: Update to 3.4.3
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
08 Apr 2021 23:33:31
3.4.2_1
|
Jan Beich (jbeich) |
devel/icu: update to 69.1
Changes: https://github.com/unicode-org/icu/releases/tag/release-69-1
Reported by: GitHub (watch releases) |
06 Apr 2021 14:31:07
3.4.2
|
Mathieu Arnold (mat) |
Remove # $FreeBSD$ from Makefiles. |
30 Mar 2021 19:20:25
  3.4.2
|
sunpoet |
Remove PYTHON_PYOEXTENSION (followup of r500018 and 569588)
PYTHON_PYOEXTENSION is opt-1.pyc for Python 3.5+. |
30 Jan 2021 13:29:58
3.4.2
|
sunpoet |
Update USES=python: math/py-pandas 1.2.0 requires Python 3.7+
PR: 250103 |
26 Jan 2021 17:36:39
3.4.2
|
sunpoet |
Update to 3.4.2
- Add NUMPY and PANDAS option
- Remove PYNUMPY
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
10 Jan 2021 23:13:55
3.4.1
|
sunpoet |
Update version requirement of RUN_DEPENDS |
06 Jan 2021 20:32:14
3.4.1
|
sunpoet |
Update to 3.4.1
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
24 Dec 2020 13:46:02
3.3.6_1
|
kai |
Relax hardcoded paths to fix build with Python 3.8.7
Since r558913 Python 3.8 incorporates BPO-42604 [1] which changed the
shared libs naming scheme. This means "EXT_SUFFIX" is now derived from
SOABI and yields with Python 3.8 to ".cpython-38.so" instead of ".so".
The affected ports strip the libaries in the "post-install" target via
hardcoded path(s) and the build fails at the end because the new extension
is not expected at this place.
Remedy the issue by adding wildcards to these paths. This should also
prepare the ports for future Python releases, which will use the new shared
libs naming scheme.
[1] https://bugs.python.org/issue42604
PR: 252057
Reported by: John Kennedy
Reviewed by: fluffy, koobs
Approved by: koobs (python) |
03 Nov 2020 00:56:27
3.3.6_1
|
jbeich |
devel/icu: update to 68.1
Changes: http://site.icu-project.org/download/68
ABI: https://abi-laboratory.pro/tracker/timeline/icu4c/
Reported by: GitHub (watch releases) |
03 Oct 2020 09:50:54
3.3.6
|
sunpoet |
Update to 3.3.6
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
09 Jul 2020 18:09:12
3.3.5
|
sunpoet |
Update to 3.3.5
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
22 Jun 2020 19:36:12
3.3.4
|
sunpoet |
Update to 3.3.4
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
19 May 2020 05:16:45
3.3.3
|
sunpoet |
Update to 3.3.3
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
23 Apr 2020 20:14:49
3.3.2_1
|
jbeich |
devel/icu: update to 67.1
Changes: http://site.icu-project.org/download/67
ABI: https://abi-laboratory.pro/tracker/timeline/icu4c/
Reported by: GitHub (watch releases) |
22 Apr 2020 21:27:58
3.3.2
|
sunpoet |
Update to 3.3.2
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
21 Apr 2020 19:39:26
3.3.1
|
sunpoet |
Update to 3.3.1
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
31 Mar 2020 23:03:46
3.2.7
|
sunpoet |
Update to 3.2.7
Changes: https://github.com/rpy2/rpy2/blob/master/NEWS |
13 Mar 2020 09:47:17
3.2.6_1
|
jbeich |
devel/icu: update to 66.1
Changes: http://site.icu-project.org/download/66
ABI: https://abi-laboratory.pro/tracker/timeline/icu4c/ |
08 Mar 2020 21:56:37
3.2.6
|
jbeich |
Drop dependency on devel/openmp
- Drop if devel/llvm* was used as a substitute
Approved by: yuri, rene (earlier version)
Differential Revision: https://reviews.freebsd.org/D23020 |
03 Feb 2020 19:46:12
3.2.6
|
sunpoet |
Update to 3.2.6
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
27 Jan 2020 20:09:06
3.2.5
|
sunpoet |
Update to 3.2.5
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
29 Dec 2019 17:33:43
3.2.4
|
sunpoet |
Update to 3.2.4
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
28 Dec 2019 07:31:15
3.2.3
|
sunpoet |
Update to 3.2.3
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
10 Dec 2019 17:11:42
3.2.2_1
|
sunpoet |
Make devel/openmp an optional dependency
- Bump PORTREVISION for dependency change
It has been merged into base system since FreeBSD 11.3/12.1. |
04 Nov 2019 16:02:01
3.2.2
|
sunpoet |
Update to 3.2.2
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
22 Oct 2019 23:34:10
3.2.1
|
sunpoet |
Update to 3.2.1
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
14 Oct 2019 12:06:13
3.2.0_1
|
pkubaj |
math/py-rpy2: fix build on GCC architectures
Use C11 compiler:
rpy2/rinterface_lib/R_API_eventloop.h:24: error: redefinition of typedef
'InputHandler'
rpy2/rinterface_lib/R_API_eventloop.h:6: error: previous declaration of
'InputHandler' was here
Approved by: mentors (implicit approval) |
03 Oct 2019 20:35:30
3.2.0_1
|
jbeich |
devel/icu: update to 65.1
Changes: http://site.icu-project.org/download/65
ABI: https://abi-laboratory.pro/tracker/timeline/icu4c/ |
30 Sep 2019 04:17:47
3.2.0
|
sunpoet |
Update to 3.2.0
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
21 Sep 2019 18:59:57
3.1.0_1
|
jbeich |
devel/openmp: update to 9.0.0
- Connect tests to the framework to help QA remaining patches
- Force rebuild all consumers after https://reviews.llvm.org/D59783
Changes: http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log
ABI: https://abi-laboratory.pro/tracker/timeline/llvm_openmp/ |
02 Sep 2019 22:43:39
3.1.0
|
sunpoet |
Update to 3.1.0
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS
https://github.com/rpy2/rpy2/blob/master/NEWS |
26 Jul 2019 20:46:57
3.0.5_1
|
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330 |
19 Jul 2019 17:03:13
3.0.5
|
sunpoet |
Update to 3.0.5
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS |
16 May 2019 23:56:38
3.0.4
|
sunpoet |
Update to 3.0.4
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS |
15 May 2019 15:56:07
3.0.3_1
|
sunpoet |
Fix runtime system detection
- Bump PORTREVISION for package change
PR: 237736
Submitted by: yuri, Rainer Hurling <rhurlin@gwdg.de> |
12 May 2019 20:10:20
3.0.3
|
sunpoet |
Update to 3.0.3
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS |
08 May 2019 16:05:53
3.0.2_2
|
jbeich |
devel/openmp: phase out
- Expire after the last version without /usr/lib/libomp.so
- Drop SOVERSION for seamless transition (i.e., avoid conditionals)
PR: 236907
Approved by: bapt (maintainer)
Differential Revision: https://reviews.freebsd.org/D19767 |
22 Apr 2019 13:16:34
3.0.2_1
|
gerald |
Related to revision 499061 bump ports with USES=fortran to have them
benefit from the improved situation where libgcc_s is only used when
absolutely necessary.
Suggested by: tijl |
21 Apr 2019 19:07:32
3.0.2
|
sunpoet |
Update to 3.0.2
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS |
09 Apr 2019 14:04:50
3.0.1_2
|
sunpoet |
Update devel/readline to 8.0
- Bump PORTREVISION of dependent ports for shlib change
Changes: https://tiswww.case.edu/php/chet/readline/CHANGES
PR: 236156
Exp-run by: antoine |
27 Mar 2019 21:11:09
3.0.1_1
|
jbeich |
devel/icu: update to 64.1
Changes: http://site.icu-project.org/download/64
ABI: https://abi-laboratory.pro/tracker/timeline/icu4c/
PR: 236325
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D19479 |
04 Mar 2019 17:58:05
3.0.1
|
sunpoet |
Update to 3.0.1
- Add NO_ARCH
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS |
12 Dec 2018 01:35:36
2.9.5_1
|
gerald |
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590 |
03 Dec 2018 19:58:37
2.9.5
|
sunpoet |
Update to 2.9.5
- Sort RUN_DEPENDS
- Reformat pkg-descr
- Update WWW
- Take maintainership
Changes: https://bitbucket.org/rpy2/rpy2/src/default/NEWS |
23 Oct 2018 11:35:04
2.9.4_1
|
jbeich |
devel/icu: update to 63.1
Changes: http://site.icu-project.org/download/63
ABI: https://abi-laboratory.pro/tracker/timeline/icu4c/
PR: 232300
Exp-run by: antoine |
01 Sep 2018 14:55:42
2.9.4
|
yuri |
math/rpy2: Update 2.7.8 -> 2.9.4; Move to math/py-rpy2
Port changes:
* Add LICENSE_FILE
* Update dependencies
* Support for python-2 is dropped
* Update WWW to https |
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