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Port details
py-pymc Markov Chain Monte Carlo Sampling Toolkit
2.3.6_3,1 math Deleted on this many watch lists=1 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Deprecated DEPRECATED: Uses deprecated version of python
Expired This port expired on: 2020-08-15
Maintainer: wen@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2008-12-14 10:38:39
Last Update: 2020-08-15 10:50:59
SVN Revision: 544927
People watching this port, also watch:: otrs, links, mupdf, R
Also Listed In: python
License: AFL
Description:
Homepage    cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦ SVNWeb
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}pymc>0:math/py-pymc@${PY_FLAVOR}
No installation instructions:
This port has been deleted.
PKGNAME: py27-pymc
Package flavors (<flavor>: <package>)
  • py27: py27-pymc
distinfo:

Packages (timestamps in pop-ups are UTC):
py27-pymc
ABIlatestquarterly
FreeBSD:11:aarch642.3.6_1,12.3.6_3,1
FreeBSD:11:amd64pkg-falloutpkg-fallout
FreeBSD:11:armv6pkg-falloutpkg-fallout
FreeBSD:11:i386pkg-falloutpkg-fallout
FreeBSD:11:mipspkg-falloutpkg-fallout
FreeBSD:11:mips64pkg-falloutpkg-fallout
FreeBSD:12:aarch642.3.6_1,1pkg-fallout
FreeBSD:12:amd64pkg-falloutpkg-fallout
FreeBSD:12:armv6pkg-falloutpkg-fallout
FreeBSD:12:armv7pkg-falloutpkg-fallout
FreeBSD:12:i386pkg-falloutpkg-fallout
FreeBSD:12:mipspkg-falloutpkg-fallout
FreeBSD:12:mips64pkg-falloutpkg-fallout
FreeBSD:12:powerpc64pkg-falloutpkg-fallout
FreeBSD:13:aarch64pkg-falloutpkg-fallout
FreeBSD:13:amd64pkg-falloutpkg-fallout
FreeBSD:13:armv6pkg-falloutpkg-fallout
FreeBSD:13:armv7pkg-falloutpkg-fallout
FreeBSD:13:i386pkg-falloutpkg-fallout
FreeBSD:13:mipspkg-falloutpkg-fallout
FreeBSD:13:mips64pkg-falloutpkg-fallout
FreeBSD:13:powerpc64pkg-falloutpkg-fallout
FreeBSD:13:riscv64pkg-falloutpkg-fallout
FreeBSD:14:aarch64pkg-falloutpkg-fallout
FreeBSD:14:amd64pkg-falloutpkg-fallout
FreeBSD:14:armv6pkg-falloutpkg-fallout
FreeBSD:14:armv7pkg-falloutpkg-fallout
FreeBSD:14:i386pkg-falloutpkg-fallout
FreeBSD:14:mipspkg-falloutpkg-fallout
FreeBSD:14:mips64pkg-falloutpkg-fallout
FreeBSD:14:powerpc64pkg-falloutpkg-fallout
FreeBSD:14:riscv64pkg-falloutpkg-fallout
 
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py27-numpy>=1.15,1<1.19,1 : math/py-numpy@py27
  2. py27-matplotlib>0 : math/py-matplotlib@py27
  3. py27-scipy>0 : science/py-scipy@py27
  4. py27-setuptools>0 : devel/py-setuptools@py27
  5. python2.7 : lang/python27
Runtime dependencies:
  1. py27-numpy>=1.15,1<1.19,1 : math/py-numpy@py27
  2. py27-matplotlib>0 : math/py-matplotlib@py27
  3. py27-scipy>0 : science/py-scipy@py27
  4. py27-setuptools>0 : devel/py-setuptools@py27
  5. python2.7 : lang/python27
Library dependencies:
  1. liblapack.so : math/lapack
  2. libblas.so : math/blas
There are no ports dependent upon this port

Configuration Options:
Options name:
USES:
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/p/pymc/
  2. https://pypi.org/packages/source/p/pymc/
Collapse this list.
Port Moves
  • port deleted on 2020-08-15
    REASON: Has expired: Uses deprecated version of python

Number of commits found: 25

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.3.6_3,1
15 Aug 2020 10:50:59
Revision:544927Original commit files touched by this commit
rene search for other commits by this committer
Remove deprecated ports:

2020-08-15 archivers/py-backports.lzma: Uses deprecated version of python
2020-08-15 archivers/py-bup: Uses deprecated version of python
2020-08-15 archivers/py-librtfcomp: Uses deprecated version of python
2020-08-15 audio/blop-lv2: Uses deprecated version of python
2020-08-15 audio/bs2b-lv2: Uses deprecated version of python
2020-08-15 audio/py-gmusicproxy: Uses deprecated version of python
2020-08-15 audio/py-karaoke: Uses deprecated version of python
2020-08-15 audio/py-openal: Uses deprecated version of python
2020-08-15 audio/py-py-jack: Uses deprecated version of python
2020-08-15 audio/py-xmms2: Uses deprecated version of python
2020-08-15 audio/triceratops-lv2: Uses deprecated version of python
2020-08-15 biology/py-biom-format: Uses deprecated version of python
2020-08-15 comms/py-bulksms: Uses deprecated version of python
(Only the first 15 lines of the commit message are shown above View all of this commit message)
2.3.6_3,1
23 Feb 2020 15:25:53
Revision:526925Original commit files touched by this commit
antoine search for other commits by this committer
Deprecate a few ports

With hat:	portmgr
2.3.6_3,1
26 Jul 2019 20:46:57
Revision:507372Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
2.3.6_2,1
12 Dec 2018 01:35:36
Revision:487272Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
2.3.6_1,1
20 Jun 2018 17:05:44
Revision:472884Original commit files touched by this commit
mat search for other commits by this committer
Use PY_FLAVOR for dependencies.

FLAVOR is the current port's flavor, it should not be used outside of
this scope.

Sponsored by:	Absolight
2.3.6_1,1
25 Apr 2018 16:42:38
Revision:468282Original commit files touched by this commit
amdmi3 search for other commits by this committer
Switch all pypi.python.org WWWs to a new PyPi home pypi.org where
they now redirect to anyway. All new urls checked to return 200,
I've fixed a couple of them in the process.

Approved by:	portmgr blanket, mat
2.3.6_1,1
10 Mar 2018 17:46:06
Revision:464084Original commit files touched by this commit
gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
2.3.6,1
08 Feb 2018 20:18:09
Revision:461265Original commit files touched by this commit
amdmi3 search for other commits by this committer
Canonicalize PyPi WWWs:
- Switch to https://
- Remove trailing slashes

Approved by:	portmgr blanket
2.3.6,1
30 Nov 2017 15:50:34
Revision:455210Original commit files touched by this commit Sanity Test Failure
mat search for other commits by this committer
Convert Python ports to FLAVORS.

  Ports using USE_PYTHON=distutils are now flavored.  They will
  automatically get flavors (py27, py34, py35, py36) depending on what
  versions they support.

  There is also a USE_PYTHON=flavors for ports that do not use distutils
  but need FLAVORS to be set.  A USE_PYTHON=noflavors can be set if
  using distutils but flavors are not wanted.

  A new USE_PYTHON=optsuffix that will add PYTHON_PKGNAMESUFFIX has been
  added to cope with Python ports that did not have the Python
  PKGNAMEPREFIX but are flavored.

  USES=python now also exports a PY_FLAVOR variable that contains the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
2.3.6,1
01 Apr 2016 14:16:20
Revision:412348Original commit files touched by this commit
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, categories m, n, o, and p.

With hat:	portmgr
Sponsored by:	Absolight
2.3.6,1
25 Dec 2015 06:05:17
Revision:404401Original commit files touched by this commit
wen search for other commits by this committer
- Update to 2.3.6 [1]
- Update my email

PR:		205561 [1]
Submitted by:	yuri@rawbw.com [1]
2.3.3,1
03 Sep 2015 10:28:16
Revision:395944Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Remove everything related to DOCS as not documentation is actually installed
- Sort USE_PYTHON

PR:		200620
Submitted by:	amdmi3
Approved by:	maintainer timeout (wenheping@gmail.com, 3 months)
2.3.3,1
23 Oct 2014 15:23:27
Revision:371398Original commit files touched by this commit
demon search for other commits by this committer
Fix compilation after recent numpy patch.

Patch by thierry@FreeBSD.org, pointed out by antoine.
2.3.3,1
16 Oct 2014 22:43:57
Revision:371025Original commit files touched by this commit
wen search for other commits by this committer
- Update to 2.3.3
2.3_2,1
10 Sep 2014 20:50:37
Revision:367888Original commit files touched by this commit
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
2.3_1,1
22 Aug 2014 07:20:30
Revision:365614Original commit files touched by this commit
antoine search for other commits by this committer
Canonicalize a few LICENSE_PERMS

With hat:	portmgr
2.3_1,1
10 Mar 2014 20:55:22
Revision:347809Original commit files touched by this commit
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
2.3,1
06 Dec 2013 15:42:33
Revision:335765Original commit files touched by this commit
mat search for other commits by this committer
- Update to 2.3,1
- Add license
- Add matplotlib dependency as per docs/INSTALL.rst
- Add DOCS option
- Add stage support

maintainer timeout.

PR:		ports/183951
Submitted by:	Johannes Jost Meixner
2.0_1,1
20 Nov 2013 20:51:25
Revision:334452Original commit files touched by this commit
sunpoet search for other commits by this committer
- Update WWW:
  - http://cheeseshop.python.org/ -> https://pypi.python.org/
  - http://pypi.python.org/ -> https://pypi.python.org/

With hat:	python
Approved by:	bapt (portmgr)
2.0_1,1
26 Oct 2013 00:52:36
Revision:331644Original commit files touched by this commit
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
2.0,1
20 Sep 2013 20:55:06
Revision:327746Original commit files touched by this commit
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
math)
2.0,1
21 Jan 2012 17:40:15
Original commit files touched by this commit
eadler search for other commits by this committer
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:    portmgr
2.0,1
20 Mar 2011 12:54:45
Original commit files touched by this commit
miwi search for other commits by this committer
- Get Rid MD5 support
2.0,1
05 Mar 2009 18:56:03
Original commit files touched by this commit
lwhsu search for other commits by this committer
- Update to 2.0

PR:             ports/130225
Submitted by:   Wen Heping <wenheping AT gmail.com> (maintainer)
2.0r1
14 Dec 2008 10:37:39
Original commit files touched by this commit
miwi search for other commits by this committer
Bayesian estimation, particularly using Markov chain Monte
Carlo (MCMC), is an increasingly relevant approach to
statistical estimation. However, few statistical software
packages implement MCMC samplers, and they are non-trivial
 to code by hand. pymc is a python package that implements
the Metropolis-Hastings algorithm as a python class, and is
extremely flexible and applicable to a large suite of problems.
pymc includes methods for summarizing output, plotting,
goodness-of-fit and convergence diagnostics.

WWW:    http://pypi.python.org/pypi/pymc/

PR:             ports/129567
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 25