Port details on branch 2022Q2 |
- py-point-annotator Annotate data with labels based on the Mann-Whitney U test
- 2.0.0_1 math =0 2.0.0_1Version of this port present on the latest quarterly branch.
- Maintainer: yuri@FreeBSD.org
- Port Added: 2021-04-27 08:57:23
- Last Update: 2024-02-29 07:18:32
- Commit Hash: 5d4139f
- Also Listed In: python
- License: GPLv3
- WWW:
- https://fri.uni-lj.si/en/laboratory/biolab
- Description:
- The point-annotator package provides functionalities to annotate data with
labels based on the Mann-Whitney U test and Hypergeometric test. Currently, we
provide examples of the fast annotation of gene expression data with the cell
types based on marker genes.
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}point-annotator>0:math/py-point-annotator@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/math/py-point-annotator/ && make install clean
- To add the package, run one of these commands:
- pkg install math/py-point-annotator
- pkg install py39-point-annotator
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above. NOTE: This is a Python port. Instead of py39-point-annotator listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-point-annotator
- Package flavors (<flavor>: <package>)
- py39: py39-point-annotator
- distinfo:
- TIMESTAMP = 1619510780
SHA256 (point-annotator-2.0.0.tar.gz) = 0bae70fc5aa67e39c230b56a7e10cea46d8fef3a52770721da3d382307fe33ef
SIZE (point-annotator-2.0.0.tar.gz) = 912918
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-setuptools-scm>0 : devel/py-setuptools-scm@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Test dependencies:
-
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-numpy>=1.16,1<1.26,1 : math/py-numpy@py39
- py39-pandas>0 : math/py-pandas@py39
- py39-scipy>0 : science/py-scipy@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- This port is required by:
- for Run
-
- biology/py-orange3-bioinformatics
Configuration Options:
- No options to configure
- Options name:
- math_py-point-annotator
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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