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Port details
py-hdbscan Clustering based on density with variable density clusters
0.8.29 math on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: sunpoet@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2019-12-29 12:48:33
Last Update: 2023-01-11 15:58:34
Commit Hash: 77d6847
Also Listed In: python
License: BSD3CLAUSE
Description:
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}hdbscan>0:math/py-hdbscan@${PY_FLAVOR}
To install the port:
cd /usr/ports/math/py-hdbscan/ && make install clean
To add the package, run one of these commands:
  • pkg install math/py-hdbscan
  • pkg install py39-hdbscan
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-hdbscan listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py39-hdbscan
Package flavors (<flavor>: <package>)
  • py39: py39-hdbscan
distinfo:

Packages (timestamps in pop-ups are UTC):
py37-hdbscan
ABIlatestquarterly
FreeBSD:11:aarch64pkg-fallout0.8.26
FreeBSD:11:amd64pkg-falloutpkg-fallout
FreeBSD:11:armv6pkg-falloutpkg-fallout
FreeBSD:11:i386pkg-falloutpkg-fallout
FreeBSD:11:mipspkg-falloutpkg-fallout
FreeBSD:11:mips64pkg-falloutpkg-fallout
FreeBSD:12:aarch64pkg-falloutpkg-fallout
FreeBSD:12:amd64pkg-falloutpkg-fallout
FreeBSD:12:armv6pkg-falloutpkg-fallout
FreeBSD:12:armv7pkg-falloutpkg-fallout
FreeBSD:12:i386pkg-falloutpkg-fallout
FreeBSD:12:mipspkg-falloutpkg-fallout
FreeBSD:12:mips64pkg-falloutpkg-fallout
FreeBSD:12:powerpc64pkg-fallout0.8.27
FreeBSD:13:aarch64pkg-falloutpkg-fallout
FreeBSD:13:amd64pkg-falloutpkg-fallout
FreeBSD:13:armv6pkg-falloutpkg-fallout
FreeBSD:13:armv7pkg-falloutpkg-fallout
FreeBSD:13:i386pkg-falloutpkg-fallout
FreeBSD:13:mipspkg-falloutpkg-fallout
FreeBSD:13:mips64pkg-falloutpkg-fallout
FreeBSD:13:powerpc64pkg-falloutpkg-fallout
FreeBSD:13:riscv64pkg-falloutpkg-fallout
FreeBSD:14:aarch64pkg-falloutpkg-fallout
FreeBSD:14:amd64pkg-falloutpkg-fallout
FreeBSD:14:armv6pkg-falloutpkg-fallout
FreeBSD:14:armv7pkg-falloutpkg-fallout
FreeBSD:14:i386pkg-falloutpkg-fallout
FreeBSD:14:mipspkg-falloutpkg-fallout
FreeBSD:14:mips64pkg-falloutpkg-fallout
FreeBSD:14:powerpc64pkg-falloutpkg-fallout
FreeBSD:14:riscv64pkg-falloutpkg-fallout
 
py38-hdbscan
ABIlatestquarterly
FreeBSD:11:aarch64pkg-falloutpkg-fallout
FreeBSD:11:amd640.8.27_10.8.27_1
FreeBSD:11:armv6pkg-falloutpkg-fallout
FreeBSD:11:i3860.8.27_10.8.27_1
FreeBSD:11:mipspkg-falloutpkg-fallout
FreeBSD:11:mips64pkg-falloutpkg-fallout
FreeBSD:12:aarch64pkg-falloutpkg-fallout
FreeBSD:12:amd64pkg-falloutpkg-fallout
FreeBSD:12:armv6pkg-falloutpkg-fallout
FreeBSD:12:armv7pkg-falloutpkg-fallout
FreeBSD:12:i386pkg-falloutpkg-fallout
FreeBSD:12:mipspkg-falloutpkg-fallout
FreeBSD:12:mips64pkg-falloutpkg-fallout
FreeBSD:12:powerpc64pkg-falloutpkg-fallout
FreeBSD:13:aarch64pkg-falloutpkg-fallout
FreeBSD:13:amd64pkg-falloutpkg-fallout
FreeBSD:13:armv6pkg-falloutpkg-fallout
FreeBSD:13:armv7pkg-falloutpkg-fallout
FreeBSD:13:i386pkg-falloutpkg-fallout
FreeBSD:13:mipspkg-falloutpkg-fallout
FreeBSD:13:mips64pkg-falloutpkg-fallout
FreeBSD:13:powerpc64pkg-falloutpkg-fallout
FreeBSD:13:riscv64pkg-falloutpkg-fallout
FreeBSD:14:aarch64pkg-falloutpkg-fallout
FreeBSD:14:amd64pkg-falloutpkg-fallout
FreeBSD:14:armv6pkg-falloutpkg-fallout
FreeBSD:14:armv7pkg-falloutpkg-fallout
FreeBSD:14:i386pkg-falloutpkg-fallout
FreeBSD:14:mipspkg-falloutpkg-fallout
FreeBSD:14:mips64pkg-falloutpkg-fallout
FreeBSD:14:powerpc64pkg-falloutpkg-fallout
FreeBSD:14:riscv64pkg-falloutpkg-fallout
 
py39-hdbscan
ABIlatestquarterly
FreeBSD:11:aarch64pkg-falloutpkg-fallout
FreeBSD:11:amd64pkg-falloutpkg-fallout
FreeBSD:11:armv6pkg-falloutpkg-fallout
FreeBSD:11:i386pkg-falloutpkg-fallout
FreeBSD:11:mipspkg-falloutpkg-fallout
FreeBSD:11:mips64pkg-falloutpkg-fallout
FreeBSD:12:aarch64pkg-fallout0.8.29
FreeBSD:12:amd640.8.290.8.29
FreeBSD:12:armv6pkg-falloutpkg-fallout
FreeBSD:12:armv7pkg-falloutpkg-fallout
FreeBSD:12:i3860.8.290.8.29
FreeBSD:12:mipspkg-falloutpkg-fallout
FreeBSD:12:mips64pkg-falloutpkg-fallout
FreeBSD:12:powerpc64pkg-falloutpkg-fallout
FreeBSD:13:aarch640.8.290.8.29
FreeBSD:13:amd640.8.290.8.29
FreeBSD:13:armv6pkg-falloutpkg-fallout
FreeBSD:13:armv70.8.290.8.29
FreeBSD:13:i3860.8.290.8.29
FreeBSD:13:mipspkg-falloutpkg-fallout
FreeBSD:13:mips64pkg-falloutpkg-fallout
FreeBSD:13:powerpc64pkg-fallout0.8.28
FreeBSD:13:riscv64pkg-falloutpkg-fallout
FreeBSD:14:aarch640.8.29pkg-fallout
FreeBSD:14:amd640.8.29pkg-fallout
FreeBSD:14:armv6pkg-falloutpkg-fallout
FreeBSD:14:armv70.8.29pkg-fallout
FreeBSD:14:i3860.8.29pkg-fallout
FreeBSD:14:mipspkg-falloutpkg-fallout
FreeBSD:14:mips64pkg-falloutpkg-fallout
FreeBSD:14:powerpc64pkg-falloutpkg-fallout
FreeBSD:14:riscv64pkg-falloutpkg-fallout
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py39-numpy>=1.16,1 : math/py-numpy@py39
  2. cython-3.9 : lang/cython@py39
  3. py39-setuptools>=63.1.0 : devel/py-setuptools@py39
  4. python3.9 : lang/python39
Test dependencies:
  1. python3.9 : lang/python39
Runtime dependencies:
  1. py39-joblib>=1.0 : devel/py-joblib@py39
  2. py39-numpy>=1.20,1 : math/py-numpy@py39
  3. py39-scikit-learn>=0.20 : science/py-scikit-learn@py39
  4. py39-scipy>=1.0 : science/py-scipy@py39
  5. py39-setuptools>=63.1.0 : devel/py-setuptools@py39
  6. python3.9 : lang/python39
There are no ports dependent upon this port

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message

Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/h/hdbscan/
  2. https://pypi.org/packages/source/h/hdbscan/
Collapse this list.
Notes from UPDATING
These upgrade notes are taken from /usr/ports/UPDATING
  • 2017-11-30
    Affects: */py*
    Author: mat@FreeBSD.org
    Reason: 
      Ports using Python via USES=python are now flavored.  All the py3-* ports
      have been removed and folded into their py-* master ports.
    
      People using Poudriere 3.2+ and binary packages do not have to do anything.
    
      For other people, to build the Python 3.6 version of, for example,
      databases/py-gdbm, you need to run:
    
        # make FLAVOR=py36 install
    
    

Number of commits found: 17

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
0.8.29
11 Jan 2023 15:58:34
commit hash:77d68471aded6907dbbcb5ef50d557e4c69db656commit hash:77d68471aded6907dbbcb5ef50d557e4c69db656commit hash:77d68471aded6907dbbcb5ef50d557e4c69db656commit hash:77d68471aded6907dbbcb5ef50d557e4c69db656 files touched by this commit
Dmitry Marakasov (amdmi3) search for other commits by this committer
*/*: rename CHEESESHOP to PYPI in MASTER_SITES

PR:			267994
Differential revision:	D37518
Approved by:		bapt
0.8.29
30 Dec 2022 09:05:00
commit hash:232b0486f184f125d6fe6a0ca01957cfa97df1a0commit hash:232b0486f184f125d6fe6a0ca01957cfa97df1a0commit hash:232b0486f184f125d6fe6a0ca01957cfa97df1a0commit hash:232b0486f184f125d6fe6a0ca01957cfa97df1a0 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
math/py-hdbscan: Update to 0.8.29

Changes:	https://github.com/scikit-learn-contrib/hdbscan/releases
07 Sep 2022 21:58:51
commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash:fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
0.8.28
07 Sep 2022 21:10:59
commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.8.28
20 Jul 2022 14:22:24
commit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5dacommit hash:f53eb28489aa8f30712cd8772d1a0e05c394a5da files touched by this commit
Tobias C. Berner (tcberner) search for other commits by this committer
math: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Aaron Dalton <aaron@daltons.ca>
  *  Alessando Sagratini <ale_sagra@hotmail.com>
  *  Alex Dupre <ale@FreeBSD.org>
  *  Alexey Dokuchaev <danfe@FreeBSD.org>
  *  Amarendra Godbole <amarendra.godbole@gmail.com>
  *  Anders Nordby <anders@FreeBSD.org>
  *  Andreas Fehlner (fehlner@gmx.de)
  *  Andrew L. Neporada <andrew@chg.ru>
  *  Andrey <gugu@zoo.rambler.ru>
  *  Andrey Zakhvatov
(Only the first 15 lines of the commit message are shown above View all of this commit message)
0.8.28
07 Mar 2022 18:11:21
commit hash:39276eb46e3754cf2f20b66e768c0ecf2204b95ccommit hash:39276eb46e3754cf2f20b66e768c0ecf2204b95ccommit hash:39276eb46e3754cf2f20b66e768c0ecf2204b95ccommit hash:39276eb46e3754cf2f20b66e768c0ecf2204b95c files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
math/py-hdbscan: Update to 0.8.28

Changes:	https://github.com/scikit-learn-contrib/hdbscan/releases
0.8.27_1
05 Nov 2021 19:14:18
commit hash:6d3f83a65467bdf3e5ece385acae8930c8d7769fcommit hash:6d3f83a65467bdf3e5ece385acae8930c8d7769fcommit hash:6d3f83a65467bdf3e5ece385acae8930c8d7769fcommit hash:6d3f83a65467bdf3e5ece385acae8930c8d7769f files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
math/py-hdbscan: Update USES=python

math/py-numpy requires Python 3.7+
0.8.27_1
25 Oct 2021 15:57:32
commit hash:0684383d4a8c0c6d5c6b4beb1ba2f19c9d95c106commit hash:0684383d4a8c0c6d5c6b4beb1ba2f19c9d95c106commit hash:0684383d4a8c0c6d5c6b4beb1ba2f19c9d95c106commit hash:0684383d4a8c0c6d5c6b4beb1ba2f19c9d95c106 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
math/py-hdbscan: Cosmetic change
0.8.27_1
18 Apr 2021 05:43:49
commit hash:c763fb239870772ff89da9a77dfe325cfc476ea2commit hash:c763fb239870772ff89da9a77dfe325cfc476ea2commit hash:c763fb239870772ff89da9a77dfe325cfc476ea2commit hash:c763fb239870772ff89da9a77dfe325cfc476ea2 files touched by this commit
Po-Chuan Hsieh (sunpoet) search for other commits by this committer
math/py-hdbscan: Strip shared library

- Bump PORTREVISION for package change
0.8.27
06 Apr 2021 14:31:07
commit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344ebcommit hash:305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
0.8.27
17 Feb 2021 18:08:44
Revision:565617Original commit files touched by this commit
sunpoet search for other commits by this committer
Update to 0.8.27

Changes:	https://github.com/scikit-learn-contrib/hdbscan/releases
0.8.26
06 Feb 2021 20:46:58
Revision:564288Original commit files touched by this commit
sunpoet search for other commits by this committer
Remove PYNUMPY
0.8.26
31 Mar 2020 23:03:41
Revision:530070Original commit files touched by this commit
sunpoet search for other commits by this committer
Update to 0.8.26

Changes:	https://github.com/scikit-learn-contrib/hdbscan/releases
0.8.25
28 Mar 2020 12:54:33
Revision:529420Original commit files touched by this commit
sunpoet search for other commits by this committer
Update to 0.8.25

Changes:	https://github.com/scikit-learn-contrib/hdbscan/releases
0.8.24
12 Jan 2020 16:07:51
Revision:522808Original commit files touched by this commit
sunpoet search for other commits by this committer
Update version requirement of RUN_DEPENDS
0.8.24
29 Dec 2019 17:47:31
Revision:521405Original commit files touched by this commit
antoine search for other commits by this committer
Unbreak bulk -a
0.8.24
29 Dec 2019 12:46:12
Revision:521283Original commit files touched by this commit
sunpoet search for other commits by this committer
Add py-hdbscan 0.8.24

HDBSCAN - Hierarchical Density-Based Spatial Clustering of Applications with
Noise. Performs DBSCAN over varying epsilon values and integrates the result to
find a clustering that gives the best stability over epsilon. This allows
HDBSCAN to find clusters of varying densities (unlike DBSCAN), and be more
robust to parameter selection.

In practice this means that HDBSCAN returns a good clustering straight away with
little or no parameter tuning -- and the primary parameter, minimum cluster
size, is intuitive and easy to select.

HDBSCAN is ideal for exploratory data analysis; it's a fast and robust algorithm
that you can trust to return meaningful clusters (if there are any).

WWW: https://github.com/scikit-learn-contrib/hdbscan

Number of commits found: 17