Port details on branch 2022Q2 |
- vcftools Tools for working with VCF genomics files
- 0.1.16_2 biology =0 0.1.16_1Version of this port present on the latest quarterly branch.
- Maintainer: jwb@FreeBSD.org
- Port Added: 2016-02-26 17:08:07
- Last Update: 2024-03-02 20:35:56
- Commit Hash: ebba67d
- License: LGPL3
- WWW:
- https://github.com/vcftools/vcftools
- Description:
- A set of tools written in Perl and C++ for working with VCF files, such as
those generated by the 1000 Genomes Project.
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- vcftools>0:biology/vcftools
- To install the port:
- cd /usr/ports/biology/vcftools/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/vcftools
- pkg install vcftools
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: vcftools
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1533330712
SHA256 (vcftools-vcftools-v0.1.16_GH0.tar.gz) = 575c13073efe65cbff6e2ab99eef12fe04536f5dc1f98de6674c848ca83cf302
SIZE (vcftools-vcftools-v0.1.16_GH0.tar.gz) = 246933
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake>=4.3 : devel/gmake
- pkgconf>=1.3.0_1 : devel/pkgconf
- autoconf>=2.71 : devel/autoconf
- automake>=1.16.5 : devel/automake
- perl5>=5.36<5.37 : lang/perl5.36
- Runtime dependencies:
-
- perl5>=5.36<5.37 : lang/perl5.36
- This port is required by:
- for Run
-
- biology/ddocent
Configuration Options:
- No options to configure
- Options name:
- biology_vcftools
- USES:
- autoreconf cpe gmake perl5 pkgconfig
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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