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SVNWeb
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Number of commits found: 22 |
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Wed, 7 Sep 2022
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[ 21:10 Stefan Eßer (se)  ]    b7f0544 (Only the first 10 of 27931 ports in this commit are shown above.  )
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above )
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Wed, 20 Jul 2022
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[ 14:20 Tobias C. Berner (tcberner) ] 37526bb (Only the first 10 of 82 ports in this commit are shown above. )
biology: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Andrey Zakhvatov
* Bob Zimmermann <rpz@cse.wustl.edu>
* Camson Huynh <chuynh@biolateral.com.au>
* Dan Siercks <dsiercks@uwm.edu>
* Fernan Aguero <fernan@iib.unsam.edu.ar>
* Hannes Hauswedell <h2+fbsdports@fsfe.org>
* J. Bacon <jwb@FreeBSD.org>
* Jason Bacon <jwb@FreeBSD.org>
* Jeremy <karlj000@unbc.ca> (Only the first 15 lines of the commit message are shown above )
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Fri, 29 Oct 2021
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[ 09:50 Stefan Eßer (se) ] 819f25b (Only the first 10 of 388 ports in this commit are shown above. )
*/*: Remove redundant '-[0-9]*' from CONFLICTS
The conflict checks compare the patterns first against the package
names without version (as reported by "pkg query "%n"), then - if
there was no match - agsinst the full package names including the
version (as reported by "pkg query "%n-%v").
Many CONFLICTS definitions used patterns like "bash-[0-9]*" to filter
for the bash package in any version. But that pattern is functionally
identical with just "bash".
Approved by: portmgr (blanket)
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Tue, 6 Apr 2021
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[ 14:31 Mathieu Arnold (mat) ] 305f148 (Only the first 10 of 29333 ports in this commit are shown above. )
Remove # $FreeBSD$ from Makefiles.
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Sat, 10 Mar 2018
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[ 06:21 yuri ]  
biology/seqan-apps, biology/seqan: Update to 2.4.0
Port changes for biology/seqan-apps:
* Changed to DISTVERSION
* Updated COMMENT
* Added USES=compiler:openmp
* Removed BROKEN_xx (upstream now claims support for these architectures)
* Removed USE_GCC
* Added SSE4/AVX2/NATIVE SIMD options
Port changes for biology/seqan:
* Changed to DISTVERSION
* Added NO_ARCH
* Added PORTDOCS=*
* Updated do-install
PR: 225682
Submitted by: Hannes Hauswedell <h2+fbsdports@fsfe.org> (maintainer)
Approved by: tcberner (mentor, implicit)
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Wed, 14 Sep 2016
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[ 19:38 pawel ]
- Update biology/seqan and bilogy/seqan-apps to version 2.2.0 [1]
- Fix spelling in pkg-descr
PR: 212682 [1]
Submitted by: Hannes Hauswedell (maintainer) [1]
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Fri, 27 May 2016
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[ 16:10 amdmi3 ]
- Do install cmake and pkgconfig modules
- While here, switch to options helpers
PR: 209710
Submitted by: h2+fbsdports@fsfe.org (maintainer)
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Tue, 10 May 2016
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[ 01:05 junovitch ] (Only the first 10 of 12 ports in this commit are shown above. )
biology/seqan: update 1.3.1 -> 2.1.1
biology/seqan1: create port from current SeqAn 1.3.1 for legacy usage
UPDATING: document SeqAn updates and seqan1 port for legacy usage
PR: 204127
Submitted by: Hannes Hauswedell <h2+fbsdports@fsfe.org>
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Sat, 21 Mar 2015
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[ 11:53 marino ]
biology/segan: Limit GCC to 4.8 while waiting for update
Due to questionable c++, GCC 4.9 and newer cannot build seqan. An update
has been in the works that will enable clang compilers and all versions
of GCC to build seqan, but it is not quite ready yet. While waiting for
it, limit the version of GCC used to 4.8.
PR: 196851
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Sun, 19 Oct 2014
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[ 07:38 mva ]
- Convert ports from benchmarks/ and biology/ to new USES=python
Approved by: portmgr (implicit)
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Wed, 10 Sep 2014
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[ 20:50 gerald ] (Only the first 10 of 3171 ports in this commit are shown above. )
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.
Part II, Bump PORTREVISIONs.
PR: 192025
Tested by: antoine (-exp runs)
Approved by: portmgr (implicit)
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Thu, 10 Jul 2014
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[ 22:29 adamw ]
Use gcc on all platforms.
PR: 191692
Submitted by: maintainer
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Sun, 1 Jun 2014
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[ 11:42 ohauer ]
- add stage support
- adjust BSDn license
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Mon, 10 Mar 2014
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[ 20:55 gerald ] (Only the first 10 of 1081 ports in this commit are shown above. )
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3. This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.
Part II, Bump PORTREVISIONs.
PR: 182136
Supported by: Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by: bdrewery (two -exp runs)
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Fri, 7 Mar 2014
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[ 15:52 bapt ]
Convert b* to USES=zip
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Sat, 26 Oct 2013
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[ 00:52 gerald ] (Only the first 10 of 1147 ports in this commit are shown above. )
Update to libmpc version 1.0.1 which brings the following fixes:
- Switched to automake 1.11.6, see CVE-2012-3386.
- #14669: Fixed extraction of CC from gmp.h.
- Fixed case of intermediate zero real or imaginary part in mpc_fma,
found by hydra with GMP_CHECK_RANDOMIZE=1346362345.
This is on top of the following changes from version 1.0
- Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
invariant sections) for the documentation.
- 100% of all lines are covered by tests
- Renamed functions
. mpc_mul_2exp to mpc_mul_2ui
. mpc_div_2exp to mpc_div_2ui (Only the first 15 lines of the commit message are shown above )
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Fri, 20 Sep 2013
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[ 15:55 bapt ] (Only the first 10 of 94 ports in this commit are shown above. )
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Sat, 17 Aug 2013
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[ 16:27 gerald ] (Only the first 10 of 93 ports in this commit are shown above. )
Replace USE_GCC=4.6+ and USE_GCC=4.4+ by USE_GCC=yes.
Right now this is a noop in the former case and a noop in the latter
case unless lang/gcc44 has been installed explicitly.
This puts a bit more emphasis on standardizing on a canonical version
"current" GCC and makes it easier to update that canonical version
by changing the default in Mk/bsd.gcc.mk and updating the lang/gcc port.
That is, USE_GCC=yes means "use a decent/modern version of GCC" without
having to worry about details.
Approved by: portmgr (bdrewery)
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Fri, 22 Mar 2013
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[ 20:06 makc ] (Only the first 10 of 464 ports in this commit are shown above. )
- convert USE_CMAKE to USES
- while here clean up some ports from CMAKE_VERBOSE, which is intended
for users
Approved by: portmgr (miwi)
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Sat, 21 Jul 2012
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[ 22:20 gerald ]
Replace USE_GCC=4.4+ by USE_GCC=4.6+ since GCC 4.4 is on its way out.
Approved by: maintainer
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Thu, 7 Jun 2012
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[ 13:04 amdmi3 ]
- Fix maintainer email
Submitted by: maintainer via private email
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Wed, 6 Jun 2012
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[ 17:51 amdmi3 ]
SeqAn is an open source C++ library of efficient algorithms
and data structures for the analysis of sequences with the
focus on biological data. The library is licensed under the
3-clause BSD license except the applications which are GPL.
WWW: http://www.seqan.de/
PR: 167571
Submitted by: Hannes <h2+fbsdports@fsfe.org>
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Number of commits found: 22 |
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