Port details on branch 2022Q2 |
- pyfasta Fast, memory-efficient, pythonic access to fasta sequence files
- 0.5.2_5 biology =0 0.5.2_5Version of this port present on the latest quarterly branch.
- Maintainer: wen@FreeBSD.org
- Port Added: 2009-11-18 05:53:48
- Last Update: 2023-06-27 19:34:34
- Commit Hash: 3d9a815
- Also Listed In: python
- License: MIT
- WWW:
- https://bitbucket.org/brentp/biostuff/src/
- Description:
- pyfasta is a python module for fast, memory-efficient, pythonic
access to fasta sequence files.
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}pyfasta>0:biology/pyfasta@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/biology/pyfasta/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/pyfasta
- pkg install py39-pyfasta
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above. NOTE: This is a Python port. Instead of py39-pyfasta listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-pyfasta
- Package flavors (<flavor>: <package>)
- distinfo:
- SHA256 (pyfasta-0.5.2.tar.gz) = ab08d75fa90253bc91933d10567d5d9cca2718f4796ef3bdc36b68df0e45b258
SIZE (pyfasta-0.5.2.tar.gz) = 19072
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-numpy>=1.16,1<1.25,1 : math/py-numpy@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Test dependencies:
-
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-numpy>=1.16,1<1.25,1 : math/py-numpy@py39
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- biology_pyfasta
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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