| Port details |
- py-pybigwig Python access to bigWig files using libBigWig
- 0.3.18 biology
 =0      0.3.18Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2021-10-13 13:09:05
- Last Update: 2021-10-13 21:21:32
- Commit Hash: ad5a060
- Also Listed In: python
- License: MIT
- Description:
- A python extension, written in C, for quick access to bigBed files and access
to and creation of bigWig files. This extension uses libBigWig for local and
remote file access.
WWW: https://pypi.org/project/pyBigWig/
- SVNWeb : git : Homepage
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}pyBigWig>0:biology/py-pybigwig@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/biology/py-pybigwig/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/py-pybigwig
- pkg install py38-pyBigWig
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.NOTE: This is a Python port. Instead of py38-pyBigWig listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py38-pyBigWig
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1617288519
SHA256 (pyBigWig-0.3.18.tar.gz) = 4c2a8c571b4100ad7c4c318c142eb48558646be52aaab28215a70426f5be31bc
SIZE (pyBigWig-0.3.18.tar.gz) = 64834
- Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- Runtime dependencies:
-
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- Library dependencies:
-
- libcurl.so : ftp/curl
- This port is required by:
- for Run
-
- biology/py-crossmap
- biology/py-deeptools
- Configuration Options:
- No options to configure
- Options name:
- biology_py-pybigwig
- USES:
- localbase python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 5
| Commit History - (may be incomplete: see SVNWeb link above for full details) |
| Date | By | Description |
|---|
13 Oct 2021 21:21:32
  0.3.18
|
Jason W. Bacon (jwb) |
biology/py-bigwig: Rename to biology/py-pybigwig
Fully match upstream name |
13 Oct 2021 18:57:58
0.3.18_1
|
Antoine Brodin (antoine) |
biology/py-pybigwig: remove, duplicate of biology/py-bigwig |
13 Oct 2021 16:02:12
0.3.18_1
|
Jason W. Bacon (jwb) |
biology/py-pybigwig: Fix poudriere build
Typo in post-install |
13 Oct 2021 16:02:12
0.3.18_1
|
Jason W. Bacon (jwb) |
biology/py-py-pybigwig: Patch out setup.py warning
Neglected to add this file during previous commit |
13 Oct 2021 13:03:21
0.3.18
|
Jason W. Bacon (jwb) |
biology/py-pybigwig: Python access to bigWig files using libBigWig
py-bigwig is a python extension, written in C, for quick access to
bigBed files and access to and creation of bigWig files. This extension
uses libBigWig for local and remote file access. |
Number of commits found: 5
|
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