Port details on branch 2022Q2 |
- py-py2bit Python interface for 2bit packed nucleotide files
- 0.3.0 biology =0 0.3.0Version of this port present on the latest quarterly branch.
- Maintainer: jwb@FreeBSD.org
- Port Added: 2021-10-13 12:57:10
- Last Update: 2023-01-11 15:58:34
- Commit Hash: 77d6847
- Also Listed In: python
- License: MIT
- WWW:
- https://github.com/deeptools/py2bit
- Description:
- py2bit is a python extension, written in C, for quick access to 2bit
files for randomly accessible, packed nucleotide sequences. The
extension uses lib2bit for file access.
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}py2bit>0:biology/py-py2bit@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/biology/py-py2bit/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/py-py2bit
- pkg install py39-py2bit
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above. NOTE: This is a Python port. Instead of py39-py2bit listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-py2bit
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1617287956
SHA256 (py2bit-0.3.0.tar.gz) = 450555c40cba66957ac8c9a4b6afb625fb34c4bb41638de78c87661ff8b682ef
SIZE (py2bit-0.3.0.tar.gz) = 16010
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Test dependencies:
-
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- This port is required by:
- for Run
-
- biology/py-deeptools
Configuration Options:
- No options to configure
- Options name:
- biology_py-py2bit
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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