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Port details
py-py2bit Python interface for 2bit packed nucleotide files
0.3.0 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: jwb@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2021-10-13 12:57:10
Last Update: 2021-10-13 12:53:53
Commit Hash: d923440
Also Listed In: python
License: MIT
Description:
SVNWeb : git : Homepage
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}py2bit>0:biology/py-py2bit@${PY_FLAVOR}
To install the port:
cd /usr/ports/biology/py-py2bit/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/py-py2bit
  • pkg install py38-py2bit
NOTE: This is a Python port. Instead of py38-py2bit listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py38-py2bit
Package flavors (<flavor>: <package>)
  • py38: py38-py2bit
distinfo:
Packages (timestamps in pop-ups are UTC):
py38-py2bit
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd64--
FreeBSD:11:armv6--
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64-0.3.0
FreeBSD:12:amd640.3.00.3.0
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i3860.3.00.3.0
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch640.3.00.3.0
FreeBSD:13:amd640.3.00.3.0
FreeBSD:13:armv6-0.3.0
FreeBSD:13:armv7-0.3.0
FreeBSD:13:i3860.3.00.3.0
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:14:aarch640.3.0-
FreeBSD:14:amd640.3.0-
FreeBSD:14:armv60.3.0-
FreeBSD:14:armv70.3.0-
FreeBSD:14:i3860.3.0-
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
Runtime dependencies:
  1. py38-setuptools>0 : devel/py-setuptools@py38
  2. python3.8 : lang/python38
This port is required by:
for Run
  1. biology/py-deeptools

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/p/py2bit/
  2. https://pypi.org/packages/source/p/py2bit/
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Number of commits found: 1

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
13 Oct 2021 12:53:53
 files touched by this commit commit hash:d92344039b4350674d959be16d5a2cfe07f87172  0.3.0
Jason W. Bacon (jwb) search for other commits by this committer
biology/py-py2bit: Python interface for 2bit packed nucleotide files

py2bit is a python extension, written in C, for quick access to 2bit
files for randomly accessible, packed nucleotide sequences. The
extension uses lib2bit for file access.

Number of commits found: 1