| Port details |
- py-py2bit Python interface for 2bit packed nucleotide files
- 0.3.0 biology
 =0      Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2021-10-13 12:57:10
- Last Update: 2021-10-13 12:53:53
- Commit Hash: d923440
- Also Listed In: python
- License: MIT
- Description:
- py2bit is a python extension, written in C, for quick access to 2bit
files for randomly accessible, packed nucleotide sequences. The
extension uses lib2bit for file access.
WWW: https://github.com/deeptools/py2bit
- SVNWeb : git : Homepage
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}py2bit>0:biology/py-py2bit@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/biology/py-py2bit/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/py-py2bit
- pkg install py38-py2bit
NOTE: This is a Python port. Instead of py38-py2bit listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py38-py2bit
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1617287956
SHA256 (py2bit-0.3.0.tar.gz) = 450555c40cba66957ac8c9a4b6afb625fb34c4bb41638de78c87661ff8b682ef
SIZE (py2bit-0.3.0.tar.gz) = 16010
- Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- Runtime dependencies:
-
- py38-setuptools>0 : devel/py-setuptools@py38
- python3.8 : lang/python38
- This port is required by:
- for Run
-
- biology/py-deeptools
- Configuration Options:
- No options to configure
- Options name:
- biology_py-py2bit
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 1
| Commit History - (may be incomplete: see SVNWeb link above for full details) |
| Date | By | Description |
|---|
13 Oct 2021 12:53:53
  0.3.0
|
Jason W. Bacon (jwb) |
biology/py-py2bit: Python interface for 2bit packed nucleotide files
py2bit is a python extension, written in C, for quick access to 2bit
files for randomly accessible, packed nucleotide sequences. The
extension uses lib2bit for file access. |
Number of commits found: 1
|
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