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Port details
py-mrcfile MRC file I/O library which is used in structural biology
1.5.0 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.4.3_1Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2022-05-01 17:39:29
Last Update: 2024-01-20 07:47:54
Commit Hash: b335dd4
Also Listed In: python
License: BSD3CLAUSE
WWW:
https://github.com/ccpem/mrcfile
Description:
mrcfile is a Python implementation of the MRC2014 file format, which is used in structural biology to store image and volume data.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • ${PYTHON_PKGNAMEPREFIX}mrcfile>0:biology/py-mrcfile@${PY_FLAVOR}
To install the port:
cd /usr/ports/biology/py-mrcfile/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/py-mrcfile
  • pkg install py39-mrcfile
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-mrcfile listed in the above command, you can pick from the names under the Packages section.
PKGNAME: py39-mrcfile
Package flavors (<flavor>: <package>)
  • py39: py39-mrcfile
distinfo:
TIMESTAMP = 1705736770 SHA256 (mrcfile-1.5.0.tar.gz) = 9e8196b8a33aa5b5237b43336cb9d08b6058b8127ea668d63b84d58bca795ec1 SIZE (mrcfile-1.5.0.tar.gz) = 55843
Packages (timestamps in pop-ups are UTC):
py39-mrcfile
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest1.5.01.5.0-1.5.01.5.0---
FreeBSD:13:quarterly1.4.3_11.4.3_1--1.5.0-1.4.3_1-
FreeBSD:14:latest1.5.01.5.0-1.5.01.5.0---
FreeBSD:14:quarterly1.4.3_11.5.0--1.5.0-1.4.3_1-
FreeBSD:15:latest1.5.01.5.0n/a1.5.0n/a-1.5.01.5.0
FreeBSD:15:quarterly--n/a-n/a---
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. py39-setuptools>=63.1.0 : devel/py-setuptools@py39
  2. python3.9 : lang/python39
Test dependencies:
  1. python3.9 : lang/python39
Runtime dependencies:
  1. py39-numpy>=1.16,1<1.26,1 : math/py-numpy@py39
  2. py39-setuptools>=63.1.0 : devel/py-setuptools@py39
  3. python3.9 : lang/python39
This port is required by:
for Run
  1. math/py-GridDataFormats
Configuration Options:
No options to configure
Options name:
biology_py-mrcfile
USES:
python
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (2 items)
Collapse this list.
  1. https://files.pythonhosted.org/packages/source/m/mrcfile/
  2. https://pypi.org/packages/source/m/mrcfile/
Collapse this list.

Number of commits found: 9

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
1.5.0
20 Jan 2024 07:47:54
commit hash: b335dd4c3df1df4c92cec74ad179fcd40b9ac66acommit hash: b335dd4c3df1df4c92cec74ad179fcd40b9ac66acommit hash: b335dd4c3df1df4c92cec74ad179fcd40b9ac66acommit hash: b335dd4c3df1df4c92cec74ad179fcd40b9ac66a files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/py-mrcfile: update 1.4.3 → 1.5.0

Reported by:	portscout
1.4.3_1
23 Apr 2023 09:09:58
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5bcommit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b files touched by this commit		 Gerald Pfeifer (gerald) search for other commits by this committer 
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
1.4.3
11 Jan 2023 15:58:34
commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656commit hash: 77d68471aded6907dbbcb5ef50d557e4c69db656 files touched by this commit		 Dmitry Marakasov (amdmi3) search for other commits by this committer 
*/*: rename CHEESESHOP to PYPI in MASTER_SITES

PR:			267994
Differential revision:	D37518
Approved by:		bapt
1.4.3
24 Sep 2022 21:54:24
commit hash: db4f1a6fea8df6cc19c68ace701dc3aaee8d69bccommit hash: db4f1a6fea8df6cc19c68ace701dc3aaee8d69bccommit hash: db4f1a6fea8df6cc19c68ace701dc3aaee8d69bccommit hash: db4f1a6fea8df6cc19c68ace701dc3aaee8d69bc files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/py-mrcfile: Update 1.4.2 -> 1.4.3

Reported by:	portscout
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit		 Stefan Eßer (se) search for other commits by this committer 
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
1.4.2
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit		 Stefan Eßer (se) search for other commits by this committer 
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
1.4.2
29 Jul 2022 08:46:46
commit hash: 62ffe981e32ecba969cedc0cd4e59028a1ae0be0commit hash: 62ffe981e32ecba969cedc0cd4e59028a1ae0be0commit hash: 62ffe981e32ecba969cedc0cd4e59028a1ae0be0commit hash: 62ffe981e32ecba969cedc0cd4e59028a1ae0be0 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/py-mrcfile: Update 1.4.0 -> 1.4.2
1.4.0
03 Jul 2022 22:01:23
commit hash: 2aa1d90e589a8339cdb055b41a97ad49d2064ad1commit hash: 2aa1d90e589a8339cdb055b41a97ad49d2064ad1commit hash: 2aa1d90e589a8339cdb055b41a97ad49d2064ad1commit hash: 2aa1d90e589a8339cdb055b41a97ad49d2064ad1 files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/py-mrcfile: Update 1.3.0 -> 1.4.0

Reported by:	portscout
1.3.0
01 May 2022 17:37:04
commit hash: 8db0b60850a52a1fb0030091485455e07f88912acommit hash: 8db0b60850a52a1fb0030091485455e07f88912acommit hash: 8db0b60850a52a1fb0030091485455e07f88912acommit hash: 8db0b60850a52a1fb0030091485455e07f88912a files touched by this commit		 Yuri Victorovich (yuri) search for other commits by this committer 
biology/py-mrcfile: New port: MRC file I/O library which is used in structural
biology

Number of commits found: 9
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