| Port details on branch 2022Q2 |
- py-goatools Tools for processing and visualizing Gene Ontology terms
- 1.1.6_1 biology
 =0      1.1.6_1Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2021-07-02 17:03:13
- Last Update: 2023-06-27 19:34:34
- Commit Hash: 3d9a815
- Also Listed In: python
- License: BSD2CLAUSE
- WWW:
- https://pypi.python.org/pypi/goatools
- Description:
- Goatools is a python library for processing Gene Ontology (GO) terms. It
includes routines for processing, filtering, and visualizing GO data.
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- ${PYTHON_PKGNAMEPREFIX}goatools>0:biology/py-goatools@${PY_FLAVOR}
- To install the port:
- cd /usr/ports/biology/py-goatools/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/py-goatools
- pkg install py39-goatools
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
NOTE: This is a Python port. Instead of py39-goatools listed in the above command, you can pick from the names under the Packages section.- PKGNAME: py39-goatools
- Package flavors (<flavor>: <package>)
- distinfo:
- TIMESTAMP = 1625181597
SHA256 (goatools-1.1.6.tar.gz) = b631a6a803818673ac815ed5f1e7158d1bd98a3ce5c93b64961dc73bdea56bca
SIZE (goatools-1.1.6.tar.gz) = 15098351
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- Test dependencies:
-
- python3.9 : lang/python39
- Runtime dependencies:
-
- py39-pandas>0 : math/py-pandas@py39
- py39-numpy>=1.16,1<1.25,1 : math/py-numpy@py39
- py39-scipy>0 : science/py-scipy@py39
- py39-XlsxWriter>0 : textproc/py-xlsxwriter@py39
- py39-statsmodels>0 : math/py-statsmodels@py39
- py39-xlrd>0 : textproc/py-xlrd@py39
- py39-docopt>0 : devel/py-docopt@py39
- py39-pydot>0 : graphics/py-pydot@py39
- py39-requests>0 : www/py-requests@py39
- py39-pygraphviz>0 : graphics/py-pygraphviz@py39
- wget>0 : ftp/wget
- py39-setuptools>=63.1.0 : devel/py-setuptools@py39
- python3.9 : lang/python39
- This port is required by:
- for Run
-
- biology/biostar-tools
Configuration Options:- No options to configure
- Options name:
- biology_py-goatools
- USES:
- python
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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