| non port: biology/phd2fasta/Makefile |
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SVNWeb
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Number of commits found: 8 |
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Wed, 23 Jul 2014
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[ 16:44 bapt  ]   (Only the first 10 of 55 ports in this commit are shown above.  )
Reset maintainership for ports not staged with no pending PR
With hat: portmgr
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Mon, 9 Jun 2014
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[ 11:21 olgeni ] (Only the first 10 of 120 ports in this commit are shown above. )
Remove indefinite articles and trailing periods from COMMENT, plus
minor COMMENT typos and surrounding whitespace fixes. Categories A-C.
CR: D196
Approved by: portmgr (bapt)
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Sat, 10 May 2014
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[ 18:07 antoine ]
Replace maintainer's email address with one that seems to work
With hat: portmgr
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Fri, 3 Jan 2014
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[ 15:46 adamw ] (Only the first 10 of 14 ports in this commit are shown above. )
Convert biology to MDOCS and MEXAMPLES
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Fri, 20 Sep 2013
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[ 15:55 bapt ] (Only the first 10 of 94 ports in this commit are shown above. )
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Fri, 26 Apr 2013
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[ 16:23 bdrewery ]
Remove unneeded escaping
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Sun, 25 May 2008
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[ 23:05 edwin ]
Teach the building cluster that these ports are not to be build
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Sat, 24 May 2008
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[ 07:01 edwin ]
New port: biology/consed viewing and editing workbench for sequence
assembly
Consed is a tool for viewing, editing, and finishing sequence
assemblies.
The port is constituted of 4 parts:
biology/phred: base caller with quality evaluation
biology/phrap: sequence assembler for shotgun sequencing
biology/consed: workbench
biology/phd2fasta: small utility
All these can be used separately; however, most function
of consed depends on the others.
Although these programs are licensed freely for academic
and nonprofit purposes, users have to contact the authors
to get the softwares.
Phred (including phd2fasta) and phrap are emailed,
and consed can be downloaded to a restricted IP address.
For commercial users, the licensing fee is ca. $10,000 at
the time of writing.
PR: ports/118548
Submitted by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
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Number of commits found: 8 |
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