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Port details
p5-bioperl Collection of Perl modules for bioinformatics
1.6.924_4 biology Deleted on this many watch lists=2 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout Version of this port present on the latest quarterly branch.
Maintainer: perl@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2000-07-28 11:06:03
Last Update: 2016-12-18 15:25:04
SVN Revision: 428868
People watching this port, also watch:: python, screen, p5-Time-Piece, p5-MIME-Tools
Also Listed In: perl5
License: ART10 GPLv1
Description:
HomepagecgitgithubgithubSVNWeb
pkg-plist: as obtained via: make generate-plist
There is no configure plist information for this port.
Dependency lines:
  • p5-bioperl>0:biology/p5-bioperl
No installation instructions:
This port has been deleted.
PKGNAME: p5-bioperl
Flavors: there is no flavor information for this port.
distinfo:
Packages (timestamps in pop-ups are UTC):
p5-bioperl
ABIlatestquarterly
FreeBSD:11:aarch64--
FreeBSD:11:amd64--
FreeBSD:11:armv61.6.924_4-
FreeBSD:11:i386--
FreeBSD:11:mips--
FreeBSD:11:mips64--
FreeBSD:12:aarch64--
FreeBSD:12:amd64--
FreeBSD:12:armv6--
FreeBSD:12:armv7--
FreeBSD:12:i386--
FreeBSD:12:mips--
FreeBSD:12:mips64--
FreeBSD:12:powerpc64--
FreeBSD:13:aarch64--
FreeBSD:13:amd64--
FreeBSD:13:armv6--
FreeBSD:13:armv7--
FreeBSD:13:i386--
FreeBSD:13:mips--
FreeBSD:13:mips64--
FreeBSD:13:powerpc64--
FreeBSD:13:riscv64--
FreeBSD:14:aarch64--
FreeBSD:14:amd64--
FreeBSD:14:armv6--
FreeBSD:14:armv7--
FreeBSD:14:i386--
FreeBSD:14:mips--
FreeBSD:14:mips64--
FreeBSD:14:powerpc64--
FreeBSD:14:riscv64--
 

Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. p5-Algorithm-Munkres>=0 : math/p5-Algorithm-Munkres
  2. p5-Array-Compare>=0 : misc/p5-Array-Compare
  3. p5-Class-AutoClass>=0 : devel/p5-Class-AutoClass
  4. p5-Clone>=0 : devel/p5-Clone
  5. p5-Convert-Binary-C>=0 : converters/p5-Convert-Binary-C
  6. p5-Data-Stag>=0 : devel/p5-Data-Stag
  7. p5-DBD-mysql>=0 : databases/p5-DBD-mysql
  8. p5-Error>=0 : lang/p5-Error
  9. p5-GD>=0 : graphics/p5-GD
  10. p5-GD-SVG>=0 : graphics/p5-GD-SVG
  11. p5-Graph>=0 : math/p5-Graph
  12. p5-GraphViz>=0 : graphics/p5-GraphViz
  13. p5-HTML-Parser>=0 : www/p5-HTML-Parser
  14. p5-HTML-TableExtract>=2 : www/p5-HTML-TableExtract
  15. p5-IO-stringy>=0 : devel/p5-IO-stringy
  16. p5-IO-String>=0 : devel/p5-IO-String
  17. p5-Math-Random>=0 : math/p5-Math-Random
  18. p5-PostScript>=0 : print/p5-PostScript
  19. p5-SOAP-Lite>=0 : net/p5-SOAP-Lite
  20. p5-Set-Scalar>=0 : devel/p5-Set-Scalar
  21. p5-Sort-Naturally>=1 : textproc/p5-Sort-Naturally
  22. p5-Spreadsheet-ParseExcel>=0 : textproc/p5-Spreadsheet-ParseExcel
  23. p5-SVG>=0 : textproc/p5-SVG
  24. p5-SVG-Graph>=0 : graphics/p5-SVG-Graph
  25. p5-Test-Most>=0 : devel/p5-Test-Most
  26. p5-Text-Shellwords>=0 : textproc/p5-Text-Shellwords
  27. p5-Text-Tabs+Wrap>=0 : textproc/p5-Text-Tabs+Wrap
  28. p5-URI>=0 : net/p5-URI
  29. p5-XML-DOM>=0 : textproc/p5-XML-DOM
  30. p5-XML-DOM-XPath>=0 : textproc/p5-XML-DOM-XPath
  31. p5-XML-LibXML>=0 : textproc/p5-XML-LibXML
  32. p5-XML-Parser>=0 : textproc/p5-XML-Parser
  33. p5-XML-SAX>=0 : textproc/p5-XML-SAX
  34. p5-XML-SAX-Writer>=0 : textproc/p5-XML-SAX-Writer
  35. p5-XML-Simple>=2 : textproc/p5-XML-Simple
  36. p5-XML-Twig>=0 : textproc/p5-XML-Twig
  37. p5-XML-Writer>=0 : textproc/p5-XML-Writer
  38. p5-YAML>=0 : textproc/p5-YAML
  39. p5-libwww>=0 : www/p5-libwww
  40. p5-libxml>=0 : textproc/p5-libxml
  41. p5-Module-Build>=0.4206 : devel/p5-Module-Build
  42. perl5>=5.24<5.25 : lang/perl5.24
Runtime dependencies:
  1. p5-Algorithm-Munkres>=0 : math/p5-Algorithm-Munkres
  2. p5-Array-Compare>=0 : misc/p5-Array-Compare
  3. p5-Class-AutoClass>=0 : devel/p5-Class-AutoClass
  4. p5-Clone>=0 : devel/p5-Clone
  5. p5-Convert-Binary-C>=0 : converters/p5-Convert-Binary-C
  6. p5-Data-Stag>=0 : devel/p5-Data-Stag
  7. p5-DBD-mysql>=0 : databases/p5-DBD-mysql
  8. p5-Error>=0 : lang/p5-Error
  9. p5-GD>=0 : graphics/p5-GD
  10. p5-GD-SVG>=0 : graphics/p5-GD-SVG
  11. p5-Graph>=0 : math/p5-Graph
  12. p5-GraphViz>=0 : graphics/p5-GraphViz
  13. p5-HTML-Parser>=0 : www/p5-HTML-Parser
  14. p5-HTML-TableExtract>=2 : www/p5-HTML-TableExtract
  15. p5-IO-stringy>=0 : devel/p5-IO-stringy
  16. p5-IO-String>=0 : devel/p5-IO-String
  17. p5-Math-Random>=0 : math/p5-Math-Random
  18. p5-PostScript>=0 : print/p5-PostScript
  19. p5-SOAP-Lite>=0 : net/p5-SOAP-Lite
  20. p5-Set-Scalar>=0 : devel/p5-Set-Scalar
  21. p5-Sort-Naturally>=1 : textproc/p5-Sort-Naturally
  22. p5-Spreadsheet-ParseExcel>=0 : textproc/p5-Spreadsheet-ParseExcel
  23. p5-SVG>=0 : textproc/p5-SVG
  24. p5-SVG-Graph>=0 : graphics/p5-SVG-Graph
  25. p5-Test-Most>=0 : devel/p5-Test-Most
  26. p5-Text-Shellwords>=0 : textproc/p5-Text-Shellwords
  27. p5-Text-Tabs+Wrap>=0 : textproc/p5-Text-Tabs+Wrap
  28. p5-URI>=0 : net/p5-URI
  29. p5-XML-DOM>=0 : textproc/p5-XML-DOM
  30. p5-XML-DOM-XPath>=0 : textproc/p5-XML-DOM-XPath
  31. p5-XML-LibXML>=0 : textproc/p5-XML-LibXML
  32. p5-XML-Parser>=0 : textproc/p5-XML-Parser
  33. p5-XML-SAX>=0 : textproc/p5-XML-SAX
  34. p5-XML-SAX-Writer>=0 : textproc/p5-XML-SAX-Writer
  35. p5-XML-Simple>=2 : textproc/p5-XML-Simple
  36. p5-XML-Twig>=0 : textproc/p5-XML-Twig
  37. p5-XML-Writer>=0 : textproc/p5-XML-Writer
  38. p5-YAML>=0 : textproc/p5-YAML
  39. p5-libwww>=0 : www/p5-libwww
  40. p5-libxml>=0 : textproc/p5-libxml
  41. perl5>=5.24<5.25 : lang/perl5.24
NOTE: dependencies for deleted ports are notoriously suspect
This port is required by:
for Build

Deleted ports which required this port:

Expand this list of 1 deleted port
  1. biology/p5-bioperl-run*
  2. Collapse this list of deleted ports.
for Run

Deleted ports which required this port:

Expand this list of 1 deleted port
  1. biology/p5-bioperl-run*
  2. Collapse this list of deleted ports.
* - deleted ports are only shown under the This port is required by section. It was harder to do for the Required section. Perhaps later...

Configuration Options:
Options name:

USES:

FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (15 items)
Collapse this list.
  1. ftp://ftp.auckland.ac.nz/pub/perl/CPAN/authors/id/C/CJ/CJFIELDS/
  2. ftp://ftp.cpan.org/pub/CPAN/authors/id/C/CJ/CJFIELDS/
  3. ftp://ftp.cpan.org/pub/CPAN/modules/by-module/bioperl/
  4. ftp://ftp.funet.fi/pub/languages/perl/CPAN/authors/id/C/CJ/CJFIELDS/
  5. ftp://ftp.kddlabs.co.jp/lang/perl/CPAN/authors/id/C/CJ/CJFIELDS/
  6. ftp://ftp.mirrorservice.org/sites/cpan.perl.org/CPAN/authors/id/C/CJ/CJFIELDS/
  7. ftp://ftp.sunet.se/pub/lang/perl/CPAN/authors/id/C/CJ/CJFIELDS/
  8. http://backpan.perl.org/authors/id/C/CJ/CJFIELDS/
  9. http://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/
  10. http://cpan.metacpan.org/modules/by-module/bioperl/
  11. http://ftp.jaist.ac.jp/pub/CPAN/authors/id/C/CJ/CJFIELDS/
  12. http://ftp.twaren.net/Unix/Lang/CPAN/authors/id/C/CJ/CJFIELDS/
  13. http://www.cpan.dk/authors/id/C/CJ/CJFIELDS/
  14. http://www.cpan.org/authors/id/C/CJ/CJFIELDS/
Collapse this list.
Port Moves
  • port moved to biology/p5-BioPerl on 2016-12-18
    REASON: Rename to match upstream naming

Number of commits found: 56

Commit History - (may be incomplete: see SVNWeb link above for full details)
CommitCreditsLog message
1.6.924_4
18 Dec 2016 15:25:04
Revision:428868Original commit files touched by this commit
sunpoet search for other commits by this committer
- Move biology/p5-bioperl to biology/p5-BioPerl
- Sort *_DEPENDS
- Bump PORTREVISION for dependent ports
1.6.924_4
20 Nov 2016 23:56:14
Revision:426677Original commit files touched by this commit
sunpoet search for other commits by this committer
- Remove unnecessary USES=shebangfix
- Convert to new options target helper
1.6.924_4
19 May 2016 10:21:25
Revision:415498Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Fix trailing whitespace in pkg-descrs, categories [a-f]*

Approved by:	portmgr blanket
1.6.924_4
01 Apr 2016 13:29:17
Revision:412344Original commit files touched by this commit
mat search for other commits by this committer
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.

With hat:	portmgr
Sponsored by:	Absolight
1.6.924_4
14 Sep 2015 12:19:50
Revision:396892Original commit files touched by this commit
mat search for other commits by this committer
Make it so that the default Perl is always called perl5.

- Move Perl's man1 files along with its man3 files.
- Move where Perl installs its modules man1 pages.
- Convert the ports installing man1 pages.
- Make different Perl versions installable at the same time.
  Though you should note that only the default version can be used to
  install Perl modules, and the non default Perl versions cannot use the
  modules installed via ports if they contain .so as they are installed
  in a version specific directory.

Reviewed by:	bapt (the Mk bits)
Exp-run by:	antoine
Sponsored by:	Absolight
Differential Revision:	https://reviews.freebsd.org/D3542
1.6.924_4
30 May 2015 12:32:00
Revision:387940Original commit files touched by this commit
amdmi3 search for other commits by this committer
- Fix shebangs
- Add NO_ARCH
- Add missing EXAMPLES option

Approved by:	portmgr blanket
MFH:		2015Q2
1.6.924_3
08 May 2015 18:12:37
Revision:385811Original commit files touched by this commit
adamw search for other commits by this committer
Reassign biology/ perl modules to perl@.

While here:

Regenerate p5-AcePerl's patches using makepatch.
Make p5-Bio-ASN1-EntrezGene depend on p5-bioperl, instead of the
other way around. Bump PORTREVISION on those two ports.
1.6.924_2
12 Mar 2015 23:00:03
Revision:381151Original commit files touched by this commit
adamw search for other commits by this committer
Some OCD cleanups on some of the perl@ ports.

- Remove dependencies in core
- Put testing depends in TEST_DEPENDS
- Remove unnecessary bsd.port.options.mk inclusions
- Remove checks for Perl versions that no longer exist in the ports tree
- Sort plists, some of which were so jumbled that I have to assume
  the plist was randomized before committing

A lot of the plist changes in this commit are moving PERL5_MAN3 after
SITE_PERL. It's repo churn now, but it makes updating the ports later
far easier.
1.6.924_1
26 Nov 2014 13:08:38
Revision:373448Original commit files touched by this commit
mat search for other commits by this committer
Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
1.6.924
20 Oct 2014 07:10:48
Revision:371237Original commit files touched by this commit
bapt search for other commits by this committer
Cleanup plist
1.6.924
04 Aug 2014 04:32:38
Revision:363961Original commit files touched by this commit
pi search for other commits by this committer
biology/p5-bioperl: fix pkg-descr sidenote link
1.6.924
27 Jul 2014 07:27:18
Revision:363015Original commit files touched by this commit
wen search for other commits by this committer
- Update to 1.6.924 [1]
- Reset maintainer to perl@

PR:		192088 [1]
Submitted by:	Kurt Jaeger<pi@FreeBSD.org> [1]
1.6.923
30 May 2014 15:46:05
Revision:355863Original commit files touched by this commit
wen search for other commits by this committer
- Update to 1.6.923
- Add STAGE support

PR:		190342
Submitted by:	Muhammad Moinur Rahman <5u623l20@gmail.com>
1.6.1_4
09 Apr 2014 09:49:03
Revision:350675Original commit files touched by this commit
bapt search for other commits by this committer
Mark as broken unstaged perl ports

With hat:	portmgr
1.6.1_4
21 Feb 2014 13:35:26
Revision:345397Original commit files touched by this commit
ehaupt search for other commits by this committer
Remove trailing whitespaces from category biology
1.6.1_4
10 Feb 2014 13:54:28
Revision:343634Original commit files touched by this commit
ehaupt search for other commits by this committer
According to the Porter's Handbook (5.12.2.3.) default options must be added to
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.

This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.

Approved by:    portmgr (bapt)
1.6.1_4
03 Jan 2014 15:46:52
Revision:338550Original commit files touched by this commit
adamw search for other commits by this committer
Convert biology to MDOCS and MEXAMPLES
1.6.1_4
20 Sep 2013 15:55:44
Revision:327709Original commit files touched by this commit
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
1.6.1_4
06 Aug 2013 08:50:49
Revision:324306Original commit files touched by this commit
az search for other commits by this committer
- Convert to new perl framework
- Trim Makefile header

Approved by:	wen@ (maintainer)
1.6.1_4
07 Jun 2013 06:51:42
Revision:320153Original commit files touched by this commit
az search for other commits by this committer
- Avoid of using SITE_PERL
- Remove depend on DB_File.pm since it part of perl distribution

PR:		ports/178877
Submitted by:	az
Approved by:	matainer (timeout)
1.6.1_4
01 Oct 2012 14:55:55
Revision:305131Original commit files touched by this commit
wen search for other commits by this committer
- Take maintainership
1.6.1_4
01 Oct 2012 14:45:17
Revision:305130Original commit files touched by this commit
tabthorpe search for other commits by this committer
- Reassign to the heap at maintainer's request
1.6.1_4
30 Jun 2012 05:21:38
Original commit files touched by this commit
az search for other commits by this committer
- Remove SITE_PERL from *_DEPENDS

Approved by: portmgr@ (bapt@)
1.6.1_4
01 Jun 2012 05:26:28
Original commit files touched by this commit
dinoex search for other commits by this committer
- update png to 1.5.10
1.6.1_3
21 Jan 2012 17:40:15
Original commit files touched by this commit
eadler search for other commits by this committer
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:    portmgr
1.6.1_3
22 Oct 2011 23:50:23
Original commit files touched by this commit
eadler search for other commits by this committer
- remove maintainer tags from pkg-descr

Approved by:    portmgr
Approved by:    bapt (mentor)
1.6.1_3
19 Mar 2011 12:38:54
Original commit files touched by this commit
miwi search for other commits by this committer
- Get Rid MD5 support
1.6.1_3
28 Mar 2010 06:47:48
Original commit files touched by this commit
dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
1.6.1_2
05 Feb 2010 11:46:55
Original commit files touched by this commit
dinoex search for other commits by this committer
- update to jpeg-8
1.6.1_1
29 Jan 2010 14:52:21
Original commit files touched by this commit
kuriyama search for other commits by this committer
- Remove unneeded dependencies which is in perl-5.8.9 dist
  (part 19; last!).

Approved by:    portmgr (itetcu)
1.6.1
04 Dec 2009 11:50:10
Original commit files touched by this commit
wen search for other commits by this committer
- Update to 1.6.1

Approved by:    maintainer (via Email)
1.6.0_1
31 Jul 2009 13:57:52
Original commit files touched by this commit
dinoex search for other commits by this committer
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by:   edwin
1.6.0
22 Jul 2009 16:27:08
Original commit files touched by this commit
pgollucci search for other commits by this committer
- lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks

PR:             ports/135398
Tested by:      2 -exp runs by pav
Approved by:    portmgr (pav)
1.6.0
05 Mar 2009 17:56:24
Original commit files touched by this commit
skv search for other commits by this committer
Remove variable PERL_VER from the ports tree at all - because
it is obsolete since Perl 5.6.0.
1.6.0
23 Feb 2009 19:31:43
Original commit files touched by this commit
garga search for other commits by this committer
- Update to 1.6.0

PR:             ports/131989
Submitted by:   maintainer
1.4_2
14 Jan 2009 14:51:38
Original commit files touched by this commit
tobez search for other commits by this committer
Fix plist with perl 5.8.9.

Approved by:    portmgr (pav, implicit)
1.4_1
17 Apr 2008 14:30:31
Original commit files touched by this commit
araujo search for other commits by this committer
- Take advantage of CPAN macro from bsd.sites.mk, change
${MASTER_SITE_PERL_CPAN} to CPAN.

PR:             ports/122674
Submitted by:   Philip M. Gollucci <pgollucci@p6m7g8.com>
Reworked by:    araujo (myself)
Approved by:    portmgr (pav)
1.4_1
08 Sep 2007 00:53:15
Original commit files touched by this commit
linimon search for other commits by this committer
Welcome bsd.perl.mk.  Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.

Work done by:   gabor
Sponsored by:   Google Summer of Code 2007
Hat:            portmgr
1.4_1
19 May 2007 20:32:57
Original commit files touched by this commit
flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
1.4
22 Jan 2006 08:20:34
Original commit files touched by this commit
edwin search for other commits by this committer
SHA256ify

Approved by:    krion@
1.4
04 Dec 2005 22:11:44
Original commit files touched by this commit
edwin search for other commits by this committer
Add conflicst:
CONFLICTS=     p5-bioperl-1.[13579]*

Submitted by:   Mauricio Herrera Cuadra <arareko@yahoo.com>,Fernan Aguero
<fernan@iib.unsam.edu.ar>
1.4
03 Sep 2004 17:04:38
Original commit files touched by this commit
leeym search for other commits by this committer
- add missing MAN1 and MAN3
- apply DATADIR, EXAMPLESDIR, and DOCSDIR in PLIST
- update the usage of NOPORTDOCS

PR:             71322
Submitted by:   leeym
Approved by:    Fernan Aguero <fernan@iib.unsam.edu.ar>
1.4
12 Aug 2004 12:48:01
Original commit files touched by this commit
mat search for other commits by this committer
After devel/p5-File-Temp has gained an IGNORE for PERL_LEVEL > 500800, all
these ports were broken because they always depended on it. I've rearranged all
the dependencies to fit the new scheme.
1.4
18 Mar 2004 18:01:13
Original commit files touched by this commit
trevor search for other commits by this committer
Add size data, approved by maintainers.
1.4
08 Mar 2004 03:29:16
Original commit files touched by this commit
linimon search for other commits by this committer
Unmark as broken for 4.x; instead, mark as ignore for perl < 5.6.
1.4
22 Feb 2004 00:06:35
Original commit files touched by this commit
kris search for other commits by this committer
BROKEN on 4.x: Configure fails
1.4
21 Jan 2004 08:34:33
Original commit files touched by this commit
linimon search for other commits by this committer
Major update from 0.7.2 to 1.4 by new maintainer.  This is almost a complete
rework of the port.

See the page http://news.open-bio.org/archives/cat_bioperl.html for the
changes between 1.2 and 1.4.  The older changes are in the CVS tree.

From the new maintainer:

        Note that this new port just handles the installation of bioperl and
        not of additional extra stuff (bioperl-gui, bioperl-corba-server,
        bioperl-corba-client). This is unlike the behaviour of the current
        port.

        The extra stuff, though still functional, had very little adoption
        among users, and does not appear to be currently supported/maintained.

PR:             ports/47303 (and subsequent)
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (new maintainer)
0.7.2
24 Oct 2003 12:05:09
Original commit files touched by this commit
ijliao search for other commits by this committer
utilize SITE_PERL

PR:             58166
Submitted by:   Cheng-Lung Sung <clsung@dragon2.net>
0.7.2
07 Mar 2003 05:56:43
Original commit files touched by this commit
ade search for other commits by this committer
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
25 Jan 2002 11:46:09
commit hash:fp1.23888@dev.null.freshports.orgcommit hash:fp1.23888@dev.null.freshports.orgcommit hash:fp1.23888@dev.null.freshports.org files touched by this commit
wjv search for other commits by this committer
- Update to version 0.7.2, somewhat overdue.  :-)    
13 Aug 2001 11:26:44
commit hash:fp1.17172@dev.null.freshports.orgcommit hash:fp1.17172@dev.null.freshports.orgcommit hash:fp1.17172@dev.null.freshports.org files touched by this commit
wjv search for other commits by this committer
- Properly list run-time dependencies in RUN_DEPENDS in Makefile.   - Deploy
%%PERL_VER%% and %%PERL_ARCH%% pragmas consistently throughout     pkg-plist. 
(Ouch, that was embarrassing.)   - Bump PORTREVISION due to the above.   -
Update my email address and the project's URL in pkg-descr.    
04 Jul 2001 14:22:15
commit hash:fp1.15795@dev.null.freshports.orgcommit hash:fp1.15795@dev.null.freshports.orgcommit hash:fp1.15795@dev.null.freshports.org files touched by this commit
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- Update to version 0.7.1   - Add a build-time message to inform the user of
available options.    
26 Jun 2001 16:09:40
commit hash:fp1.15526@dev.null.freshports.orgcommit hash:fp1.15526@dev.null.freshports.orgcommit hash:fp1.15526@dev.null.freshports.org files touched by this commit
wjv search for other commits by this committer
Embarrassingly long overdue update to 0.7.0, including optional support for  
GUI (Tk) and CORBA extensions.    
13 Oct 2000 13:43:24
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jeh search for other commits by this committer
Update to version 0.6.2    
08 Oct 2000 00:23:30
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asami search for other commits by this committer
Convert category biology to new layout.  
28 Jul 2000 15:06:03
commit hash:fp1.2387@dev.null.freshports.orgcommit hash:fp1.2387@dev.null.freshports.orgcommit hash:fp1.2387@dev.null.freshports.org files touched by this commit
nbm search for other commits by this committer
Add BioPerl, a collection of Perl5 mods for bioinformatics/genomics    

Number of commits found: 56