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non port: biology/ncbi-vdb/Makefile

Number of commits found: 9

Sunday, 23 Apr 2023
09:09 Gerald Pfeifer (gerald) search for other commits by this committer
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b 8d3e020
Wednesday, 7 Sep 2022
21:10 Stefan E├čer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.

There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.

The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.

Approved by:		portmgr (tcberner)
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 b7f0544
Wednesday, 20 Jul 2022
14:35 Tobias C. Berner (tcberner) search for other commits by this committer
science/hdf5: bump PORTREVISION of consumers

The SO-version increased in the update to 1.12.2 in
a43418b81530f7e897abfbe18dd59f44265a1a0f .

Reported by:	VVD <vvd@unislabs.com>
commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 commit hash: 5564b3b420db29745d2d4981d1963200ddf53e35 5564b3b
Sunday, 10 Apr 2022
19:11 Charlie Li (vishwin) search for other commits by this committer
textproc/libxml2: bump all LIB_DEPENDS consumers

This is a separate commit to facilitate easier cherry-picking for
quarterly.

PR: 262853, 262940, 262877, 263126
Approved by: fluffy (mentor)
commit hash: d63665f7cd9c99880704a3c5bc221829cb009744 commit hash: d63665f7cd9c99880704a3c5bc221829cb009744 commit hash: d63665f7cd9c99880704a3c5bc221829cb009744 commit hash: d63665f7cd9c99880704a3c5bc221829cb009744 d63665f
Saturday, 26 Mar 2022
08:27 Matthias Fechner (mfechner) search for other commits by this committer
textproc/libxml2: bump all dependencies

This should make sure that all dependent ports will pick
up the new version commited with a13ec21cd733f67a9fc0dc00ab45268bdc236246
commit hash: 247c7db7513f1264922428278678da641c5a3f52 commit hash: 247c7db7513f1264922428278678da641c5a3f52 commit hash: 247c7db7513f1264922428278678da641c5a3f52 commit hash: 247c7db7513f1264922428278678da641c5a3f52 247c7db
Friday, 28 Jan 2022
12:14 Tijl Coosemans (tijl) search for other commits by this committer
security/mbedtls: Update to 2.28.0 and fix make test

Also bump dependent ports for library version change.

PR:		255084
commit hash: b93e64d3c3240d1e4a8fc510b14aa2175e5be012 commit hash: b93e64d3c3240d1e4a8fc510b14aa2175e5be012 commit hash: b93e64d3c3240d1e4a8fc510b14aa2175e5be012 commit hash: b93e64d3c3240d1e4a8fc510b14aa2175e5be012 b93e64d
Monday, 26 Apr 2021
14:17 Jan Beich (jbeich) search for other commits by this committer
devel/libepoll-shim: update to 0.0.20210418

Changes:	https://github.com/jiixyj/epoll-shim/compare/v0.0.20210322...v0.0.20210418
Reported by:	portscout
Approved by:	manu
Differential Revision:	https://reviews.freebsd.org/D29822
commit hash: bc9e901a170f2015b41f1a0c4b23c17436d0e432 commit hash: bc9e901a170f2015b41f1a0c4b23c17436d0e432 commit hash: bc9e901a170f2015b41f1a0c4b23c17436d0e432 commit hash: bc9e901a170f2015b41f1a0c4b23c17436d0e432 bc9e901
Monday, 12 Apr 2021
18:03 Yuri Victorovich (yuri) search for other commits by this committer
biology/ncbi-vdb: Restore static libs installed with symlinks as shared libs are
usually installed

Symlinks like this libxx.a->libxx.a.N.N.N first looked broken but it turned out
that this is intentional.

PR:		223273
commit hash: 353678f54b5fcc1821077ab3f84fe389a1ef2b9b commit hash: 353678f54b5fcc1821077ab3f84fe389a1ef2b9b commit hash: 353678f54b5fcc1821077ab3f84fe389a1ef2b9b commit hash: 353678f54b5fcc1821077ab3f84fe389a1ef2b9b 353678f
09:29 Yuri Victorovich (yuri) search for other commits by this committer
New port: biology/ncbi-vdb: NCBI's virtualized back-end for accessing Sequence
Read Archive

PR:		223273
Submitted by:	Motomichi Matsuzaki <mzaki@niid.go.jp> (original version)
commit hash: d55fba431adf6bc61c3553dd91625a4b16115cf6 commit hash: d55fba431adf6bc61c3553dd91625a4b16115cf6 commit hash: d55fba431adf6bc61c3553dd91625a4b16115cf6 commit hash: d55fba431adf6bc61c3553dd91625a4b16115cf6 d55fba4

Number of commits found: 9