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non port: biology/mmseqs2/distinfo

Number of commits found: 2

Saturday, 26 Jun 2021
16:29 Jason W. Bacon (jwb) search for other commits by this committer
biology/mmseqs2: Enable at least SSE2 by default

Hangs when built with clang and minimal optimizations, so build with
GCC temporarily.  Upstream is investigating.
commit hash: b8bf1cfd41e7503311351d0246b328c7abcea8b1 commit hash: b8bf1cfd41e7503311351d0246b328c7abcea8b1 commit hash: b8bf1cfd41e7503311351d0246b328c7abcea8b1 commit hash: b8bf1cfd41e7503311351d0246b328c7abcea8b1 b8bf1cf
Thursday, 24 Jun 2021
17:31 Jason W. Bacon (jwb) search for other commits by this committer
biology/mmseqs2: Ultra fast and sensitive sequence search and clustering suite

MMseqs2 (Many-against-Many sequence searching) is a software suite to search
and cluster huge protein and nucleotide sequence sets. MMseqs2 is open source
GPL-licensed software implemented in C++ for FreeBSD, Linux, MacOS, and (via
via cygwin) Windows. The software is designed to run on multiple cores and
servers and exhibits very good scalability. MMseqs2 can run 10000 times
faster than BLAST. At 100 times its speed it achieves almost the same
sensitivity. It can perform profile searches with the same sensitivity as
PSI-BLAST at over 400 times its speed.
commit hash: cf14bbb325bb8696c275ebbabff3da95a75815eb commit hash: cf14bbb325bb8696c275ebbabff3da95a75815eb commit hash: cf14bbb325bb8696c275ebbabff3da95a75815eb commit hash: cf14bbb325bb8696c275ebbabff3da95a75815eb cf14bbb

Number of commits found: 2