non port: biology/gemma/Makefile |
SVNWeb
|
Number of commits found: 16 |
Sun, 23 Apr 2023
|
[ 09:09 Gerald Pfeifer (gerald) ] 8d3e020 (Only the first 10 of 2091 ports in this commit are shown above. )
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
|
Wed, 7 Sep 2022
|
[ 21:10 Stefan Eßer (se) ] b7f0544 (Only the first 10 of 27931 ports in this commit are shown above. )
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above )
|
Wed, 12 Jan 2022
|
[ 19:41 Tobias C. Berner (tcberner) ] 654acd8 (Only the first 10 of 66 ports in this commit are shown above. )
math/gsl: bump portrevision of consumers after update to 2.7.1
PR: 260201
|
Wed, 16 Jun 2021
|
[ 19:31 Tobias C. Berner (tcberner) ] 63e653a (Only the first 10 of 66 ports in this commit are shown above. )
math/gsl: update to 2.7
From [1]
* What is new in gsl-2.7:
* fixed doc bug for gsl_histogram_min_bin (lhcsky at 163.com)
* fixed bug #60335 (spmatrix test failure, J. Lamb)
* fixed bug #36577
* clarified documentation on interpolation accelerators (V. Krishnan)
* fixed bug #45521 (erroneous GSL_ERROR_NULL in ode-initval2, thanks to M.
Sitte)
* fixed doc bug #59758
* fixed bug #58202 (rstat median for n=5)
* added support for native C complex number types in gsl_complex
when using a C11 compiler
* upgraded to autoconf 2.71, automake 1.16.3, libtool 2.4.6 (Only the first 15 lines of the commit message are shown above )
|
Wed, 7 Apr 2021
|
[ 08:09 Mathieu Arnold (mat) ] cf118cc (Only the first 10 of 8873 ports in this commit are shown above. )
One more small cleanup, forgotten yesterday.
Reported by: lwhsu
|
Tue, 6 Apr 2021
|
[ 14:31 Mathieu Arnold (mat) ] 305f148 (Only the first 10 of 29333 ports in this commit are shown above. )
Remove # $FreeBSD$ from Makefiles.
|
Sat, 2 Jan 2021
|
[ 22:05 jwb ]
biology/gemma: Upgrade to 0.98.3
Minor bug fixes and enhancements
Reported by: portscout
|
Sat, 12 Dec 2020
|
[ 17:04 thierry ] (Only the first 10 of 80 ports in this commit are shown above. )
- Upgrade math/eigen3 to 3.3.8;
- Add some dependencies which might be detected by Find_Package but not
registered;
- Bump PORTREVISION of consumers.
PR: 250833
Submitted by: /me
Approved by: tcberner@ (KDE / maintainer) + exp-run
|
Wed, 6 May 2020
|
[ 16:39 yuri ] (Only the first 10 of 37 ports in this commit are shown above. )
Bump 37 ports depending on math/openblas through USES=blaslapack:openblas
because after the recent math/openblas update the library name changed in
openblas
|
Thu, 30 Jan 2020
|
[ 14:17 swills ] (Only the first 10 of 90 ports in this commit are shown above. )
Fix math/openblas and bump dependent ports
* Fix build on i386 [1]
* Fix science/code_saturne build with new openblas [2]
* Avoid installing private headers [3]
* Prevent build from optimizing for host by correcting build confg [4]
* Bump portrevision of dependent ports [5]
This is correcting issues from r523749 [1][2][4] and r515970 [3]
PR: 231371
Reported by: build cluster [1]
Reported by: Dima Pasechnik <dimpase+freebsd@gmail.com> [2]
Reported by: many [5]
Reviewed by: mat, bapt
Approved by: implicit, since this is a build fix
|
Tue, 21 Jan 2020
|
[ 22:03 swills ] (Only the first 10 of 32 ports in this commit are shown above. )
math/openblas: Update to 0.3.7
While here, improve formatting and fix build of dependant ports.
PR: 231371
Submitted by: yuri (initial version), pkubaj (ppc fixes)
Approved by: Eijiro Shibusawa <phd_kimberlite@yahoo.co.jp> (maintainer)
|
Tue, 14 Jan 2020
|
[ 22:35 jwb ]
biology/gemma: Unbreak build
Conflict between cblas.h and gsl_cblas.h
|
Fri, 25 Oct 2019
|
[ 23:41 tcberner ] (Only the first 10 of 64 ports in this commit are shown above. )
math/gsl: update to 2.6
- math/p5-Math-GSL does not seem to have any upstream activity to make it work
with this version -> mark it broken
- this also breaks the two consumers of this port
- biology/gemma: has a conflict with cblas, and is makred broken.
PR: 241363
Exp-run by: antoine
|
Fri, 26 Jul 2019
|
[ 20:46 gerald ] (Only the first 10 of 3853 ports in this commit are shown above. )
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330
|
Sat, 18 May 2019
|
[ 22:41 jwb ]
biology/gemma: Lowercase PORTNAME, remove unnecesary USE_GCC
Reported by: danfe, Gerald Pfeifer
|
Fri, 17 May 2019
|
[ 14:45 jwb ]
biology/gemma: Genome-wide Efficient Mixed Model Association
GEMMA is a software toolkit for fast application of linear mixed models (LMMs)
and related models to genome-wide association studies (GWAS) and other
large-scale data sets.
|
Number of commits found: 16 |