Port details on branch 2022Q2 |
- embassy Collection of contributed EMBOSS applications
- 6.2.0_2 biology
=0 6.2.0_2Version of this port present on the latest quarterly branch.
- BROKEN: does not fetch
DEPRECATED: Not staged. See http://lists.freebsd.org/pipermail/freebsd-ports-announce/2014-May/000080.html This port expired on: 2014-08-31 IGNORE: is marked as broken: does not fetch
- There is no maintainer for this port.
- Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
- Port Added: 2004-11-26 16:35:20
- Last Update: 2014-09-01 11:37:14
- SVN Revision: 366862
- License: not specified in port
- WWW:
- http://emboss.sourceforge.net/apps/#Embassy
- Description:
- EMBASSY is a collection of contributed EMBOSS software. From the web
pages:
"EMBOSS is GPL licensed. The libraries are under the Lesser GPL (LGPL).
Programs which have been included from third parties who have their own
licencing terms are kept apart under the EMBASSY grouping.
This allows the EMBOSS libraries to link to other software, and only
requires that software to have an LGPL-compatible licence. Phylip, for
example, fits this model.
But, to the user they do look exactly like EMBOSS aplications."
WWW: http://emboss.sourceforge.net/apps/#Embassy
-
cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- embassy>0:biology/embassy
- No installation instructions:
- This port has been deleted.
- PKGNAME: embassy
- Flavors: there is no flavor information for this port.
- distinfo:
- There is no distinfo for this port.
No package information for this port in our database- Sometimes this happens. Not all ports have packages.
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake : devel/gmake
- x11.pc : x11/libX11
- xpm.pc : x11/libXpm
- Runtime dependencies:
-
- x11.pc : x11/libX11
- xpm.pc : x11/libXpm
- Library dependencies:
-
- libnucleus.so : biology/emboss
- libiconv.so.3 : converters/libiconv
- libXm.so.4 : x11-toolkits/open-motif
- There are no ports dependent upon this port
Configuration Options:
- ===> The following configuration options are available for embassy-6.2.0_2:
CBSTOOLS=on: CBS Tools
DOMAINATRIX=on: Protein domain apps
DOMALIGN=on: Protein domain apps
DOMSEARCH=on: Protein domain apps
EMNU=on: EMBOSS simple menu
ESIM4=on: Align cDNA/EST to genome
HMMER=on: HMM alignment and searches
IPRSCAN=on: InterPro scan
MEMENEW=on: Motif detection
MIRA=on: Whole Genome shotgun and EST assembler
MSE=on: A multiple sequence screen editor
MYEMBOSS=on: Examples for developers of EMBOSS apps
PHYLIPNEW=on: Phylogeny inference
SIGNATURE=on: Protein domain apps
STRUCTURE=on: Protein domain apps
TOPO=on: Transmembrane display
VIENNA=on: RNA folding
===> Use 'make config' to modify these settings
- Options name:
- N/A
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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