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Port details
edlib Fast C++ library for sequence alignment using edit distance
1.2.7 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 1.2.7Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2021-01-19 09:42:35
Last Update: 2022-09-07 21:58:51
Commit Hash: fb16dfe
License: MIT
WWW:
https://github.com/Martinsos/edlib
Description:
A lightweight and super fast C/C++ library for sequence alignment using edit distance.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (16 items)
Collapse this list.
  1. @ldconfig
  2. /usr/local/share/licenses/edlib-1.2.7/catalog.mk
  3. /usr/local/share/licenses/edlib-1.2.7/LICENSE
  4. /usr/local/share/licenses/edlib-1.2.7/MIT
  5. include/edlib.h
  6. lib/cmake/edlib/edlib-config-version.cmake
  7. lib/cmake/edlib/edlib-config.cmake
  8. lib/cmake/edlib/edlib-targets-release.cmake
  9. lib/cmake/edlib/edlib-targets.cmake
  10. lib/libedlib.so
  11. lib/libedlib.so.1
  12. lib/libedlib.so.1.2.6
  13. libdata/pkgconfig/edlib-1.pc
  14. @owner
  15. @group
  16. @mode
Collapse this list.
Dependency lines:
  • edlib>0:biology/edlib
To install the port:
cd /usr/ports/biology/edlib/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/edlib
  • pkg install edlib
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: edlib
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1629562632 SHA256 (Martinsos-edlib-1.2.7-d5774b4_GH0.tar.gz) = 7ad9f8a8a92641ec25f0b8fcc5ac83184c442e422b04211eaddc8a5c864927fd SIZE (Martinsos-edlib-1.2.7-d5774b4_GH0.tar.gz) = 4318606

Packages (timestamps in pop-ups are UTC):
edlib
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest1.2.71.2.71.2.6.202012021.2.71.2.7---
FreeBSD:13:quarterly1.2.71.2.71.2.71.2.71.2.71.2.71.2.71.2.7
FreeBSD:14:latest1.2.71.2.71.2.71.2.71.2.71.2.7-1.2.7
FreeBSD:14:quarterly1.2.71.2.7-1.2.71.2.71.2.71.2.71.2.7
FreeBSD:15:latest1.2.71.2.7n/a1.2.7n/a1.2.71.2.71.2.7
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. cmake : devel/cmake-core
  2. ninja : devel/ninja
There are no ports dependent upon this port

Configuration Options:
No options to configure
Options name:
biology_edlib
USES:
cmake:testing compiler:c++14-lang
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://codeload.github.com/Martinsos/edlib/tar.gz/d5774b4?dummy=/
Collapse this list.

Number of commits found: 7

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
1.2.7
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
1.2.7
21 Aug 2021 17:12:15
commit hash: d3e8f7613170da190c903dc2e2fd6e191f128a48commit hash: d3e8f7613170da190c903dc2e2fd6e191f128a48commit hash: d3e8f7613170da190c903dc2e2fd6e191f128a48commit hash: d3e8f7613170da190c903dc2e2fd6e191f128a48 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
biology/edlib: Update 1.2.6.20201202 -> 1.2.7

Reported by:	portscout
1.2.6.20201202
07 Apr 2021 08:09:01
commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
1.2.6.20201202
06 Apr 2021 14:31:07
commit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
1.2.6.20201202
20 Jan 2021 02:31:33
Revision:562108Original commit files touched by this commit
linimon search for other commits by this committer
Fix build on GCC-based systems by adding compiler:c++14-lang to USES:

  CMake Error in CMakeLists.txt:
  Target "runTests" requires the language dialect "CXX14" , but CMake does
  not know the compile flags to use to enable it.

Approved by:	portmgr (tier-2 blanket)
1.2.6.20201202
19 Jan 2021 09:41:54
Revision:562038Original commit files touched by this commit
yuri search for other commits by this committer
New port: biology/edlib: Fast C++ library for sequence alignment using edit
distance

Number of commits found: 7