non port: biology/boinc-simap/Makefile |
Number of commits found: 28 |
Friday, 19 Sep 2014
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23:05 rene
biology/boinc-simap: Deprecate, project shutting down on 2015-01-01
Obtained from: http://boincsimap.org/boincsimap/forum_thread.php?id=88
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Wednesday, 10 Sep 2014
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20:50 gerald
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.
Part II, Bump PORTREVISIONs.
PR: 192025
Tested by: antoine (-exp runs)
Approved by: portmgr (implicit)
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Tuesday, 4 Feb 2014
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17:54 rene
Drop maintainership BOINC ports, old machine running them gave up.
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Sunday, 29 Dec 2013
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10:41 rene
The hmmer binary was renamed upstream to indicate that it is now an
archive file, adjust the port so that fetch and extract work again.
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Monday, 23 Dec 2013
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18:03 rene
Several fixes:
- install files as the BOINC user/group, this ensures that work units can
be downloaded and sent
- try to remove ~boinc/projects if empty
- do not specify -o and -g parameters to ${INSTALL}, this ensures the
package can be built as user
- only extract the hmmer binary from the hmmer distribution file, this
ensures correct permissions when modifying app_info.xml as user
- Bump PORTREVISION
Reviewed by: bapt
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Tuesday, 24 Sep 2013
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12:00 rene
Use value of BOINC_CLIENT_HOME in pkg-message
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Monday, 23 Sep 2013
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22:01 rene
- Add stagedir support
- Rewrap lines
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19:54 rene
Respect 'make check-sanity' for this port too.
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Friday, 20 Sep 2013
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15:55 bapt
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Monday, 29 Apr 2013
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12:20 rene
Use bsd.port.options.mk instead of bsd.port.{pre|post}.mk
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Wednesday, 6 Mar 2013
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23:31 rene
Remove compatibility with FreeBSD 7.X
While here pet Makefile headers.
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Friday, 28 Dec 2012
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21:59 rene
Take over maintainership.
Approved by: pav (previous maintainer)
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Thursday, 27 Dec 2012
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20:12 rene
Use the new project URL to let the application attach coorectly to the
project, and some cleanups:
- use optionsNG
- update commands in pkg-install.in
- improve %%AMD64%% comment handling
- convert Makefile header
- remove unused variable SIMAP_URL
Bump PORTREVISION
PR: ports/174748
Submitted by: myself
Approved by: maintainer (pav@)
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Wednesday, 16 May 2012
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13:46 pav
- Adjust BOINC_* variables to be consistent with new system in boinc-client
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Friday, 4 Nov 2011
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20:39 pav
- Fix fetch and update WWW
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Thursday, 29 Jul 2010
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08:30 pav
- Update the libmap instructions for amd64/8
Submitted by: Rick van der Zwet <info@rickvanderzwet.nl>
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Sunday, 28 Mar 2010
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06:47 dinoex
- update to 1.4.1
Reviewed by: exp8 run on pointyhat
Supported by: miwi
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Friday, 5 Feb 2010
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11:46 dinoex
- update to jpeg-8
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Thursday, 1 Oct 2009
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07:34 pav
- Annotate that 8.x no longer needs libmap hack
Reported by: rene
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Monday, 5 Jan 2009
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17:27 pav
- Remove conditional checks relevant only on FreeBSD 5.x and older
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Friday, 6 Jun 2008
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13:08 edwin
Bump portrevision due to upgrade of devel/gettext.
The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).
PR: ports/124340
Submitted by: edwin@
Approved by: portmgr (pav)
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Sunday, 8 Jul 2007
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11:56 pav
- Runs on 7.0-CURRENT with compat6x
Reported by: Rene Ladan <r.c.ladan@gmail.com>
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Saturday, 19 May 2007
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20:32 flz
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
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Tuesday, 10 Oct 2006
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11:31 pav
- Add hmmer 5.09 application
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Monday, 17 Jul 2006
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21:44 pav
- Update to 5.10
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Saturday, 24 Jun 2006
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21:04 pav
- Provide SSE optimized application as an option
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Thursday, 22 Jun 2006
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18:53 pav
- Instruct amd64 users to libmap libpthread.so.2 to libc_r.so.6
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Monday, 19 Jun 2006
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20:32 pav
SIMAP (Similarity Matrix of Proteins) is a public database of pre-calculated
protein similarities that plays a key role in many bioinformatics methods. It
contains about all currently published protein sequences and is continuously
updated.
The computational effort for keeping SIMAP up-to-date is constantly increasing.
Please help to update SIMAP by calculating protein similarities on your
computer.
WWW: http://boinc.bio.wzw.tum.de/boincsimap/
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Number of commits found: 28 |