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non port: biology/biolibc-tools/pkg-plist

Number of commits found: 7

Saturday, 2 Mar 2024
18:44 Nuno Teixeira (eduardo) search for other commits by this committer
biology/biolibc-tools: Move man pages to share/man

Approved by:	portmgr (blanket)
commit hash: 17190fc6cf5983d6e0a7d7709323b6e7b720c2b4 commit hash: 17190fc6cf5983d6e0a7d7709323b6e7b720c2b4 commit hash: 17190fc6cf5983d6e0a7d7709323b6e7b720c2b4 commit hash: 17190fc6cf5983d6e0a7d7709323b6e7b720c2b4 17190fc
Friday, 11 Aug 2023
20:40 Jason W. Bacon (jwb) search for other commits by this committer
biology/biolibc-tools: Update to 0.1.4.9

Update for biolibc GFF3 API changes
commit hash: e9b6ad4f597e4afa869bbc2c0b6e1ba2f411e263 commit hash: e9b6ad4f597e4afa869bbc2c0b6e1ba2f411e263 commit hash: e9b6ad4f597e4afa869bbc2c0b6e1ba2f411e263 commit hash: e9b6ad4f597e4afa869bbc2c0b6e1ba2f411e263 e9b6ad4
Tuesday, 13 Dec 2022
00:47 Jason W. Bacon (jwb) search for other commits by this committer
biology/biolibc-tools: Update to 0.1.4

Add deromanize subcommand to convert Roman numeral chromosome IDs
fastx-stats: Report standard deviation for read length

Changes:    https://github.com/auerlab/biolibc-tools/releases
commit hash: a06965636b7360863524462378326b7145eaebb4 commit hash: a06965636b7360863524462378326b7145eaebb4 commit hash: a06965636b7360863524462378326b7145eaebb4 commit hash: a06965636b7360863524462378326b7145eaebb4 a069656
Saturday, 11 Jun 2022
14:26 Jason W. Bacon (jwb) search for other commits by this committer
biology/biolibc-tools: Update to 0.1.3

Add vcf-downsample subcommand
Improvements to build system
extract-seq: Recurse to output subfeatures
Numerous other minor enhancements and fixes

Changes:        https://github.com/auerlab/biolibc-tools/tags
commit hash: f869d6b4120504eac85add6520b1b74e6144ac5d commit hash: f869d6b4120504eac85add6520b1b74e6144ac5d commit hash: f869d6b4120504eac85add6520b1b74e6144ac5d commit hash: f869d6b4120504eac85add6520b1b74e6144ac5d f869d6b
Tuesday, 15 Mar 2022
21:36 Jason W. Bacon (jwb) search for other commits by this committer
biology/biolibc-tools: Update to 0.1.2

New fastx-stats and ensembl2gene subcommands
Minor updates for biolibc 0.2.2 API changes
Minor bug fixes and ennancements
commit hash: b8604e856abfd2bce2cd31e86dc4693be4d38763 commit hash: b8604e856abfd2bce2cd31e86dc4693be4d38763 commit hash: b8604e856abfd2bce2cd31e86dc4693be4d38763 commit hash: b8604e856abfd2bce2cd31e86dc4693be4d38763 b8604e8
Tuesday, 14 Dec 2021
19:45 Jason W. Bacon (jwb) search for other commits by this committer
biology/biolibc-tools: Update to 0.1.1

Make all programs subcommands of "blt"
Several new commands
Updates for evolving libxtend and biolibc APIs
Add --version flag
Numerous minor fixes and enhancements

Changes: https://github.com/auerlab/biolibc-tools/releases/tag/0.1.1
commit hash: 3a7f92ec883e0d6926de8afe2e1c2ee8a005c13f commit hash: 3a7f92ec883e0d6926de8afe2e1c2ee8a005c13f commit hash: 3a7f92ec883e0d6926de8afe2e1c2ee8a005c13f commit hash: 3a7f92ec883e0d6926de8afe2e1c2ee8a005c13f 3a7f92e
Monday, 30 Aug 2021
13:09 Jason W. Bacon (jwb) search for other commits by this committer
biology/biolibc-tools: High-performance tools based on biolibc

Biolibc-tools is a collection of simple fast, memory-efficient,
programs for processing biological data.  These are simple programs
built on biolibc that are not complex enough to warrant a separate
project.
commit hash: 904aa60469601239cefbb5dde7f5aa33ccac9a21 commit hash: 904aa60469601239cefbb5dde7f5aa33ccac9a21 commit hash: 904aa60469601239cefbb5dde7f5aa33ccac9a21 commit hash: 904aa60469601239cefbb5dde7f5aa33ccac9a21 904aa60

Number of commits found: 7