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SVNWeb
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Number of commits found: 6 |
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Sat, 20 Mar 2021
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[ 17:14 jwb  ]   (Only the first 10 of 17 ports in this commit are shown above.  )
biology/htslib: Update to 1.12
biology/samtools: Update to 1.12
biology/bcftools: Update to 1.12
Numerous enhancements, performance improvements, and bug fixes since 1.11
Build-tested all other htslib dependents, no revbumps should be needed
Reported by: portscout
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Tue, 13 Aug 2019
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[ 16:00 mat ] (Only the first 10 of 144 ports in this commit are shown above. )
Convert to UCL & cleanup pkg-message (categories a-c)
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Wed, 25 Oct 2017
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[ 10:19 pizzamig ] (Only the first 10 of 25 ports in this commit are shown above. )
biology/htslib biology/bcftools biology/samtools: Update to 1.6
PR: 223094
Submitted by: mzaki@niid.go.jp
Approved by: cartwright@asu.edu (maintainer)
Approved by: olivier (mentor)
Differential Revision: https://reviews.freebsd.org/D12768
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Thu, 19 May 2016
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[ 11:09 amdmi3 ] (Only the first 10 of 385 ports in this commit are shown above. )
- Fix trailing whitespace in pkg-messages
Approved by: portmgr blanket
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Fri, 25 Dec 2015
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[ 01:31 junovitch ] (Only the first 10 of 27 ports in this commit are shown above. )
biology/{bcftools,htslib,samtools}: update 1.2.x -> 1.3
- Update ports to 1.3 and set BUILD_DEPENDS of dependent ports to require
version 1.3 of htslib.
- Add CURL option to htslib
- Add TEST_TARGET with perl and bash dependencies for testing
- Tidy up spacing and pkg-message's
PR: 205524
PR: 205525
PR: 205526
Submitted by: cartwright@asu.edu (maintainer)
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Fri, 5 Jun 2015
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[ 21:01 pi ] (Only the first 10 of 12 ports in this commit are shown above. )
New port: biology/bcftools
BCFtools is a set of utilities that manipulate variant calls in the
Variant Call Format (VCF) and its binary counterpart BCF. All
commands work transparently with both VCFs and BCFs, both
uncompressed and BGZF-compressed.
WWW: http://www.htslib.org/
PR: 199747
Submitted by: cartwright@asu.edu
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Number of commits found: 6 |
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