notbugAs an Amazon Associate I earn from qualifying purchases.
Want a good read? Try FreeBSD Mastery: Jails (IT Mastery Book 15)
Want a good monitor light? See my photosAll times are UTC
Ukraine
This referral link gives you 10% off a Fastmail.com account and gives me a discount on my Fastmail account.

Get notified when packages are built

A new feature has been added. FreshPorts already tracks package built by the FreeBSD project. This information is displayed on each port page. You can now get an email when FreshPorts notices a new package is available for something on one of your watch lists. However, you must opt into that. Click on Report Subscriptions on the right, and New Package Notification box, and click on Update.

Finally, under Watch Lists, click on ABI Package Subscriptions to select your ABI (e.g. FreeBSD:14:amd64) & package set (latest/quarterly) combination for a given watch list. This is what FreshPorts will look for.

non port: biology/bcftools/distinfo

Number of commits found: 13

Friday, 24 Feb 2023
23:30 Jason W. Bacon (jwb) search for other commits by this committer
biology/bcftools: Update to 1.17

Numerous enhancements and bug fixes

Changes: https://github.com/samtools/bcftools/releases

Reported by:    portscout
commit hash: 65b8ab93497d27dee8afc5c3451a5303210595d1 commit hash: 65b8ab93497d27dee8afc5c3451a5303210595d1 commit hash: 65b8ab93497d27dee8afc5c3451a5303210595d1 commit hash: 65b8ab93497d27dee8afc5c3451a5303210595d1 65b8ab9
Thursday, 5 Jan 2023
23:19 Jason W. Bacon (jwb) search for other commits by this committer
biology/bcftools: Update to 1.16

New plugin variant-distance to annotate records with distance to the
nearest variant
Numerous minor enhancements and bug fixes

Changes: https://github.com/samtools/bcftools/releases
commit hash: adfc9433b02c9fbd48a51de471dc4f43a22d240f commit hash: adfc9433b02c9fbd48a51de471dc4f43a22d240f commit hash: adfc9433b02c9fbd48a51de471dc4f43a22d240f commit hash: adfc9433b02c9fbd48a51de471dc4f43a22d240f adfc943
Saturday, 26 Feb 2022
15:04 Jason W. Bacon (jwb) search for other commits by this committer
biology/bcftools: Update to 1.15

Several small enhancements
Changes: https://github.com/samtools/bcftools/releases

Reported by:    portscout
commit hash: 734d2c4df0a562d5be9ef181424ebec5ab7b2222 commit hash: 734d2c4df0a562d5be9ef181424ebec5ab7b2222 commit hash: 734d2c4df0a562d5be9ef181424ebec5ab7b2222 commit hash: 734d2c4df0a562d5be9ef181424ebec5ab7b2222 734d2c4
Saturday, 18 Dec 2021
17:56 Jason W. Bacon (jwb) search for other commits by this committer
biology/bcftools: Update to 1.14

A few minor enhancements and bug fixes

Changes: https://github.com/samtools/bcftools/tags
commit hash: 9302b3e21ff4b44c0003d01b51c648a40ac30ac2 commit hash: 9302b3e21ff4b44c0003d01b51c648a40ac30ac2 commit hash: 9302b3e21ff4b44c0003d01b51c648a40ac30ac2 commit hash: 9302b3e21ff4b44c0003d01b51c648a40ac30ac2 9302b3e
Monday, 12 Jul 2021
13:30 Jason W. Bacon (jwb) search for other commits by this committer
biology/bcftools: Update to 1.13

Numerous enhancements and bug fixes

Changes:        https://github.com/samtools/bcftools/releases/tag/1.13
Reported by:    portscout
commit hash: 94c639f5ff163d57758c0631c7280c9f0fd2e86e commit hash: 94c639f5ff163d57758c0631c7280c9f0fd2e86e commit hash: 94c639f5ff163d57758c0631c7280c9f0fd2e86e commit hash: 94c639f5ff163d57758c0631c7280c9f0fd2e86e 94c639f
Saturday, 20 Mar 2021
17:14 jwb search for other commits by this committer
biology/htslib: Update to 1.12
biology/samtools: Update to 1.12
biology/bcftools: Update to 1.12

Numerous enhancements, performance improvements, and bug fixes since 1.11

Build-tested all other htslib dependents, no revbumps should be needed

Reported by:    portscout
Original commitRevision:568874 
Thursday, 5 Nov 2020
20:34 jwb search for other commits by this committer
biology/bcftools: Upgrade to 1.11

Numerous new features, bug fixes and performance enhancements
https://github.com/samtools/bcftools/releases/tag/1.11

Reported by:    portscout
Original commitRevision:554157 
Monday, 3 Aug 2020
18:16 jwb search for other commits by this committer
biology/bcftools: Upgrade to 1.10.2

Numerous bug fixes and enhancements since 1.9:
https://github.com/samtools/bcftools/tags

Take maintainership per ports/248089.

PR:             ports/248089
Original commitRevision:544096 
Thursday, 2 Aug 2018
19:30 fernape search for other commits by this committer
biology/bcftools: update to 1.9

While here:

* Update LICENSE handling
* Move all commands to bin/

PR:	230169
Submitted by:	ndowens.fbsd@yandex.com
Approved by:	tcberner (mentor)
Differential Revision:	https://reviews.freebsd.org/D16543
Original commitRevision:476247 
Wednesday, 25 Oct 2017
10:19 pizzamig search for other commits by this committer
biology/htslib biology/bcftools biology/samtools: Update to 1.6

PR:		223094
Submitted by:	mzaki@niid.go.jp
Approved by:	cartwright@asu.edu (maintainer)
Approved by:	olivier (mentor)
Differential Revision:	https://reviews.freebsd.org/D12768
Original commitRevision:452840 
Thursday, 26 May 2016
20:28 pi search for other commits by this committer
biology/{htslib|samtools|bcftools}: 1.3 -> 1.3.1

Changes:
  https://sourceforge.net/p/samtools/mailman/message/35033807/

PR:		209653
Submitted by:	cartwright@asu.edu (maintainer)
Original commitRevision:415914 
Friday, 25 Dec 2015
01:31 junovitch search for other commits by this committer
biology/{bcftools,htslib,samtools}: update 1.2.x -> 1.3

- Update ports to 1.3 and set BUILD_DEPENDS of dependent ports to require
  version 1.3 of htslib.
- Add CURL option to htslib
- Add TEST_TARGET with perl and bash dependencies for testing
- Tidy up spacing and pkg-message's

PR:		205524
PR:		205525
PR:		205526
Submitted by:	cartwright@asu.edu (maintainer)
Original commitRevision:404398 
Friday, 5 Jun 2015
21:01 pi search for other commits by this committer
New port: biology/bcftools

BCFtools is a set of utilities that manipulate variant calls in the
Variant Call Format (VCF) and its binary counterpart BCF. All
commands work transparently with both VCFs and BCFs, both
uncompressed and BGZF-compressed.

WWW: http://www.htslib.org/

PR:		199747
Submitted by:	cartwright@asu.edu
Original commitRevision:388638 

Number of commits found: 13