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non port: biology/atac-seq/Makefile

Number of commits found: 6

Wednesday, 10 Jan 2024
16:05 Jason W. Bacon (jwb) search for other commits by this committer 
biology/atac-seq: Update to 0.2.0

Add biology/py-macs3 dep to metaport
commit hash: 999c86b2511492b85bac5a25fbcc60b38542afee commit hash: 999c86b2511492b85bac5a25fbcc60b38542afee commit hash: 999c86b2511492b85bac5a25fbcc60b38542afee commit hash: 999c86b2511492b85bac5a25fbcc60b38542afee 999c86b
Friday, 28 Jul 2023
14:35 Jason W. Bacon (jwb) search for other commits by this committer 
biology/atac-seq: Add curl to metaport deps

Standardizing on a download tool simplifies pipelines
commit hash: 3ef8325ef67662c4c8aa5c8cb2fcde7e1ccc3fe4 commit hash: 3ef8325ef67662c4c8aa5c8cb2fcde7e1ccc3fe4 commit hash: 3ef8325ef67662c4c8aa5c8cb2fcde7e1ccc3fe4 commit hash: 3ef8325ef67662c4c8aa5c8cb2fcde7e1ccc3fe4 3ef8325
Sunday, 23 Apr 2023
09:09 Gerald Pfeifer (gerald) search for other commits by this committer 
*: Bump PORTREVISIONs for math/mpc update to 1.3.1
commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b commit hash: 8d3e020ed032a8db00208994d0db646de7dc6f5b 8d3e020
Sunday, 19 Feb 2023
18:11 Jason W. Bacon (jwb) search for other commits by this committer 
biology/atac-seq: Drop biology/igv dep

Non-essential and currently broken
commit hash: ada9b15851e566b9c67ef8374eba913aa3561292 commit hash: ada9b15851e566b9c67ef8374eba913aa3561292 commit hash: ada9b15851e566b9c67ef8374eba913aa3561292 commit hash: ada9b15851e566b9c67ef8374eba913aa3561292 ada9b15
Thursday, 12 Jan 2023
19:00 Jason W. Bacon (jwb) search for other commits by this committer 
biology/atac-seq: Update to 0.1.1

Fix dependency: bowtie -> bowtie2
Add www/webbrowser for portable FastQC report viewing
commit hash: ff57c60617fbb592629afa7684fb9ee1562d8344 commit hash: ff57c60617fbb592629afa7684fb9ee1562d8344 commit hash: ff57c60617fbb592629afa7684fb9ee1562d8344 commit hash: ff57c60617fbb592629afa7684fb9ee1562d8344 ff57c60
Wednesday, 11 Jan 2023
23:47 Jason W. Bacon (jwb) search for other commits by this committer 
biology/atac-seq: Metaport for ATAC-Seq analysis

Metaport to install tools for typical ATAC-Seq analysis, including QC,
adapter trimming, alignment, and differential analysis.
commit hash: d2c13cc6fdc1acf4009e477d00ec09b03ff2bacf commit hash: d2c13cc6fdc1acf4009e477d00ec09b03ff2bacf commit hash: d2c13cc6fdc1acf4009e477d00ec09b03ff2bacf commit hash: d2c13cc6fdc1acf4009e477d00ec09b03ff2bacf d2c13cc

Number of commits found: 6
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