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Port details
R-cran-Biobase Base functions for Bioconductor
2.62.0 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.62.0Version of this port present on the latest quarterly branch.
Maintainer: bofh@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2023-12-15 12:57:12
Last Update: 2023-12-15 12:55:44
Commit Hash: 82e85eb
License: ART20
WWW:
https://bioconductor.org/packages/Biobase
Description:
Functions that are needed by many other packages or which replace R functions.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb - no subversion history for this port

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (3 items)
Collapse this list.
  1. /usr/local/share/licenses/R-cran-Biobase-2.62.0/catalog.mk
  2. /usr/local/share/licenses/R-cran-Biobase-2.62.0/LICENSE
  3. /usr/local/share/licenses/R-cran-Biobase-2.62.0/ART20
Collapse this list.
Dependency lines:
  • R-cran-Biobase>0:biology/R-cran-Biobase
To install the port:
cd /usr/ports/biology/R-cran-Biobase/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/R-cran-Biobase
  • pkg install R-cran-Biobase
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: R-cran-Biobase
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1702637713 SHA256 (Biobase_2.62.0.tar.gz) = ef753acc499c2504e226bf76e0acc08b7aa370fc60cc369bb8ebc1913f57d37e SIZE (Biobase_2.62.0.tar.gz) = 1795862

Packages (timestamps in pop-ups are UTC):
R-cran-Biobase
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest2.62.02.62.0-2.62.02.62.0---
FreeBSD:13:quarterly2.62.02.62.0-2.62.02.62.0-2.62.02.62.0
FreeBSD:14:latest2.62.02.62.0-2.62.02.62.0---
FreeBSD:14:quarterly2.62.02.62.0-2.62.02.62.0-2.62.02.62.0
FreeBSD:15:latest2.62.02.62.0n/a2.62.0n/a-2.62.02.62.0
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. R-cran-BiocGenerics>=0.27.1 : biology/R-cran-BiocGenerics
  2. R : math/R
  3. gfortran12 : lang/gcc12
  4. as : devel/binutils
Runtime dependencies:
  1. R-cran-BiocGenerics>=0.27.1 : biology/R-cran-BiocGenerics
  2. R : math/R
  3. gfortran12 : lang/gcc12
This port is required by:
for Build
  1. math/R-cran-NMF
for Run
  1. math/R-cran-NMF

Configuration Options:
No options to configure
Options name:
biology_R-cran-Biobase
USES:
cran:auto-plist,compiles
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
Collapse this list.
  1. https://www.bioconductor.org/packages/release/bioc/src/contrib/
Collapse this list.

Number of commits found: 1

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.62.0
15 Dec 2023 12:55:44
commit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aacommit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aacommit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aacommit hash: 82e85eb5bf499342674cc1fb30366cf0134d21aa files touched by this commit
Muhammad Moinur Rahman (bofh) search for other commits by this committer
biology/R-cran-Biobase: New port

Functions that are needed by many other packages or which replace R
functions.

WWW: https://bioconductor.org/packages/Biobase

Number of commits found: 1